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IVF0015074 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015074
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L35
Genome locationchr04:32100377..32101008
RNA-Seq ExpressionIVF0015074
SyntenyIVF0015074
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044224.1 RING-H2 finger protein ATL74-like [Cucumis melo var. makuwa]8.33e-7199.16Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQ WHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAV
        VGFGYLVALKTQIGLANAV
Subjt:  VGFGYLVALKTQIGLANAV

KAE8650972.1 hypothetical protein Csa_002588 [Cucumis sativus]4.41e-9283.43Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ES+Y+SWHVG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----

Query:  ---HQIGVGFGYLV-ALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF
              GVG GY+V ALKTQI LANA+G SFSSIIWVYLCVFV+WLQKCKYLWA+LLL+PLFPLLLFQLDTFVHLLHLR F
Subjt:  ---HQIGVGFGYLV-ALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHF

TYK24910.1 50S ribosomal protein L35 [Cucumis melo var. makuwa]6.15e-72100Show/hide
Query:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
        GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
Subjt:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF

Query:  GYLVALKTQIGLANA
        GYLVALKTQIGLANA
Subjt:  GYLVALKTQIGLANA

XP_008442323.1 PREDICTED: uncharacterized protein LOC103486229 [Cucumis melo]1.01e-113100Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
        VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
Subjt:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF

XP_038906422.1 uncharacterized protein LOC120092221 [Benincasa hispida]8.02e-7472.28Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQ--
        MA+G RRSFKI+VHAKICNLYIKLKATLK PSGK QRLLKLDKLLI  DSKSES +LVQRRRTLKSRMLSFVKKHLG  RSK+PH+ES+ QSW VG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQ--

Query:  -----IGVGFGYLVALKTQIGLANAVGSSFSSIIWVYLCV--FVIWLQKCKYL--WAVLLLVPLFPLLLFQLDTFVHLLHLRHF
              GVG GYL+AL T IGL NA+  SFSS IWV LC+  FV+WL KCKYL  WA+L L+ L PL L QLD FVHLLHLRHF
Subjt:  -----IGVGFGYLVALKTQIGLANAVGSSFSSIIWVYLCV--FVIWLQKCKYL--WAVLLLVPLFPLLLFQLDTFVHLLHLRHF

TrEMBL top hitse value%identityAlignment
A0A0A0LCL9 50S ribosomal protein L356.4e-5181.43Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----
        MAIGHRRSFKISV AKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKS SR+L+QRRRTLKSRMLSFVKKHLG  RSK PH+ES+Y+SWHVG    
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVG----

Query:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLC
              GVG GY +VALKTQI LANA+G SFSSIIWVYLC
Subjt:  ---HQIGVGFGY-LVALKTQIGLANAVGSSFSSIIWVYLC

A0A1S3B4Y8 uncharacterized protein LOC1034862292.3e-88100Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
        VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF
Subjt:  VGFGYLVALKTQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF

A0A5A7TM08 RING-H2 finger protein ATL74-like1.0e-5699.16Show/hide
Query:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG
        MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQ WHVGHQIG
Subjt:  MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIG

Query:  VGFGYLVALKTQIGLANAV
        VGFGYLVALKTQIGLANAV
Subjt:  VGFGYLVALKTQIGLANAV

A0A5D3DNQ2 50S ribosomal protein L351.5e-55100Show/hide
Query:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
        GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF
Subjt:  GHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGF

Query:  GYLVALKTQIGLANA
        GYLVALKTQIGLANA
Subjt:  GYLVALKTQIGLANA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATAGGTCATCGGCGGTCATTCAAAATCAGCGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTTCCTTCCGGGAAATTCCAACG
CCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGGTCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTCAGCTTCGTCAAGA
AGCATTTGGGGCGTTGCCGATCTAAAATCCCACATTCTGAATCTAAATATCAATCTTGGCATGTTGGCCATCAGATTGGTGTGGGATTTGGTTATCTGGTTGCACTCAAG
ACACAAATTGGGCTTGCAAATGCGGTTGGTTCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTATATGGCTCCAGAAATGTAAGTACCTTTGGGCAGT
GCTATTGCTAGTTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
GTCATGTGTTGCAATGGCGATAGGTCATCGGCGGTCATTCAAAATCAGCGTTCATGCCAAGATCTGTAACCTTTATATCAAGCTGAAGGCCACTCTGAAACTTCCTTCCG
GGAAATTCCAACGCCTCCTAAAGCTTGATAAACTACTCATCGAAGTGGATTCCAAATCCGAATCTCGGGTCCTCGTTCAACGGCGACGGACTTTGAAATCTCGAATGCTC
AGCTTCGTCAAGAAGCATTTGGGGCGTTGCCGATCTAAAATCCCACATTCTGAATCTAAATATCAATCTTGGCATGTTGGCCATCAGATTGGTGTGGGATTTGGTTATCT
GGTTGCACTCAAGACACAAATTGGGCTTGCAAATGCGGTTGGTTCCAGCTTCAGCTCCATTATATGGGTTTACCTGTGTGTATTTGTTATATGGCTCCAGAAATGTAAGT
ACCTTTGGGCAGTGCTATTGCTAGTTCCTCTGTTTCCTCTCTTACTCTTCCAATTGGATACATTTGTACATCTTTTACATTTACGCCACTTTTTCTAA
Protein sequenceShow/hide protein sequence
MAIGHRRSFKISVHAKICNLYIKLKATLKLPSGKFQRLLKLDKLLIEVDSKSESRVLVQRRRTLKSRMLSFVKKHLGRCRSKIPHSESKYQSWHVGHQIGVGFGYLVALK
TQIGLANAVGSSFSSIIWVYLCVFVIWLQKCKYLWAVLLLVPLFPLLLFQLDTFVHLLHLRHFF