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IVF0015124 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015124
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr08:17268324..17268548
RNA-Seq ExpressionIVF0015124
SyntenyIVF0015124
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032215.1 hypothetical protein E6C27_scaffold219G00270 [Cucumis melo var. makuwa]2.66e-2369.44Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF
        M   FKEVLLENV +KEQIANLN++VQG+EA VS LNS+VSQ SF+L NLTS MIAHSN S HI + H +QF
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF

KAA0040567.1 hypothetical protein E6C27_scaffold262G001370 [Cucumis melo var. makuwa]5.48e-2074.24Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAK
        MN AF EV L+NVA K+QI NLN QVQ LEA+VSNLNS V QLSF+L NLTS+MIAHSN S HIAK
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAK

KAA0049609.1 transposase [Cucumis melo var. makuwa]2.23e-2071.23Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA
        MN  FKE+LLENVA KEQIA+LNTQVQGLEA VSNLNS VSQLS +LTNLT +MI++     HI KRH R+FA
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA

TYK00745.1 hypothetical protein E5676_scaffold61472G00010 [Cucumis melo var. makuwa]9.30e-2470.83Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF
        M   FKEVLLENV +KEQIANLN++VQG+EA VS LNS+VSQ SF+L NLTS MIAHSN S HI + H RQF
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]1.31e-2071.23Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA
        MN  FKE+LLENVA KEQIA+LNTQVQGLEA VSNLNS VSQLS +LTNLT +MI++     HI KRH R+FA
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA

TrEMBL top hitse value%identityAlignment
A0A5A7SSN6 Uncharacterized protein2.9e-1669.44Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF
        M   FKEVLLENV +KEQIANLN++VQG+EA VS LNS+VSQ SF+L NLTS MIAHSN S HI + H +QF
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF

A0A5A7U806 Transposase2.9e-1671.23Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA
        MN  FKE+LLENVA KEQIA+LNTQVQGLEA VSNLNS VSQLS +LTNLT +MI++     HI KRH R+FA
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA

A0A5D3BD35 Pol7.0e-1568.57Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGR
        MN  FKE+LLENV +K+QIA+LNTQV GLEA VS LNS V QLS +LTNLTS+M+AHSN S HI  RH +
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGR

A0A5D3BNP3 Uncharacterized protein1.3e-1670.83Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF
        M   FKEVLLENV +KEQIANLN++VQG+EA VS LNS+VSQ SF+L NLTS MIAHSN S HI + H RQF
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQF

A0A5D3CVL7 Uncharacterized protein2.9e-1671.23Show/hide
Query:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA
        MN  FKE+LLENVA KEQIA+LNTQVQGLEA VSNLNS VSQLS +LTNLT +MI++     HI KRH R+FA
Subjt:  MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACAGCTTTTAAGGAAGTGCTTTTGGAGAATGTGGCGATAAAGGAACAAATCGCCAACCTTAACACTCAAGTGCAAGGCTTAGAAGCCATAGTCTCCAACCTTAA
CTCTGTGGTCTCGCAACTCTCCTTTTCCCTGACTAATTTAACAAGTATGATGATTGCTCACTCCAACTCGTCAAGTCACATTGCGAAGCGACATGGTAGGCAGTTTGCGA
CATAA
mRNA sequenceShow/hide mRNA sequence
ATGAACACAGCTTTTAAGGAAGTGCTTTTGGAGAATGTGGCGATAAAGGAACAAATCGCCAACCTTAACACTCAAGTGCAAGGCTTAGAAGCCATAGTCTCCAACCTTAA
CTCTGTGGTCTCGCAACTCTCCTTTTCCCTGACTAATTTAACAAGTATGATGATTGCTCACTCCAACTCGTCAAGTCACATTGCGAAGCGACATGGTAGGCAGTTTGCGA
CATAA
Protein sequenceShow/hide protein sequence
MNTAFKEVLLENVAIKEQIANLNTQVQGLEAIVSNLNSVVSQLSFSLTNLTSMMIAHSNSSSHIAKRHGRQFAT