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IVF0015125 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015125
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent DNA helicase SRS2-like protein
Genome locationchr11:15893218..15894032
RNA-Seq ExpressionIVF0015125
SyntenyIVF0015125
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96628.1 ATP-dependent DNA helicase SRS2-like protein [Cucumis melo var. makuwa]4.45e-27100Show/hide
Query:  MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
        MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
Subjt:  MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
TrEMBL top hitse value%identityAlignment
A0A5D3BEK7 ATP-dependent DNA helicase SRS2-like protein9.3e-22100Show/hide
Query:  MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
        MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
Subjt:  MATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTTTGTCAAACCAGATGGGTACCTCGAGGAGAATGGCGACTTCGATCGGCAATGACATTCCTAATTCTTTGAACAACTTTCGAGGGGCACGACAATTGCAAGC
GACGACGACAACTTTGAGCGGCGTTCTTCCTAACCCTTACGGCTCAAGTTTCAAAAGAAGGCGGCCGAGAAAGTTGACTTTTGGCCGACAACGGTGA
mRNA sequenceShow/hide mRNA sequence
CAATGAAGATTGAGCCAAAAACAAAAGATAAACAAAATAAAGAAAAGTGAAAGCACCTGGTATTGCAACGAATAAGAATTAATGGTTCTTTGTGTATCTTTCCAGGATGG
AGATTTTGTCAAACCAGATGGGTACCTCGAGGAGAATGGCGACTTCGATCGGCAATGACATTCCTAATTCTTTGAACAACTTTCGAGGGGCACGACAATTGCAAGCGACG
ACGACAACTTTGAGCGGCGTTCTTCCTAACCCTTACGGCTCAAGTTTCAAAAGAAGGCGGCCGAGAAAGTTGACTTTTGGCCGACAACGGTGACCTTCGGCCGCGACGGC
AATTTCACGCGGCCTTCTTCCTAACCCTTCCCGCACAAGTTTCAAGCGACGGCGGTGGAGTTCAATTTCCTTTGCTTGGAGTGGTGGAGTTCTCGTGAAGCGGTGATCTT
TAGCCGGCACAAGTTTCACG
Protein sequenceShow/hide protein sequence
MEILSNQMGTSRRMATSIGNDIPNSLNNFRGARQLQATTTTLSGVLPNPYGSSFKRRRPRKLTFGRQR