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IVF0015191 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015191
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCST complex subunit CTC1
Genome locationchr03:25890513..25891498
RNA-Seq ExpressionIVF0015191
SyntenyIVF0015191
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063096.1 putative transmembrane protein [Cucumis melo var. makuwa]6.17e-79100Show/hide
Query:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT
        MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT
Subjt:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT

Query:  MAVGTQQETKQEEPASQNPSANA
        MAVGTQQETKQEEPASQNPSANA
Subjt:  MAVGTQQETKQEEPASQNPSANA

KAG6598392.1 hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia]1.37e-5782.4Show/hide
Query:  MSFPIEQQSPP--GLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA
        MS PIEQQSPP  G+   Y GHP SGSVGPVIGVLVVIIVFAVVAVVVGRLCSG SIMGYGHFDLESWAETKCSSCIDGRI+  PPRV+ S AA  SLP 
Subjt:  MSFPIEQQSPP--GLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA

Query:  GTMAVGTQQETKQEEPASQNPSANA
        GTMAV TQQETKQEEPASQNP+A+A
Subjt:  GTMAVGTQQETKQEEPASQNPSANA

XP_022144319.1 uncharacterized protein LOC111014030 [Momordica charantia]2.14e-5782.26Show/hide
Query:  MSFPIEQQSPP--GLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAA-ASSLP
        MS PIEQQSPP  G+QQ Y GH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S A  A++LP
Subjt:  MSFPIEQQSPP--GLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAA-ASSLP

Query:  AGTMAVGTQQETKQEEPASQNPSA
        A TMAV TQQETKQEEPASQNPSA
Subjt:  AGTMAVGTQQETKQEEPASQNPSA

XP_031737057.1 uncharacterized protein LOC116402140 [Cucumis sativus]1.02e-7596.77Show/hide
Query:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAST-AAASSLPAG
        MS PIEQQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAST AAASSLPAG
Subjt:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAST-AAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

XP_038885752.1 uncharacterized protein LOC120076044 [Benincasa hispida]2.44e-6386.61Show/hide
Query:  MSFPIEQQSPPG--LQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA
        MS PIEQQSPP   +QQNY GHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI+PPPPRVD   AAA+SLPA
Subjt:  MSFPIEQQSPPG--LQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA

Query:  GTMAVGTQQETKQE--EPASQNPSANA
        GTMA   QQETKQE  EPASQNP ANA
Subjt:  GTMAVGTQQETKQE--EPASQNPSANA

TrEMBL top hitse value%identityAlignment
A0A0A0LP67 Uncharacterized protein1.5e-5796.77Show/hide
Query:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAS-TAAASSLPAG
        MS PIEQQSPPG+QQNYVGHPGSGSVGPVIGVL+VIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAS TAAASSLPAG
Subjt:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDAS-TAAASSLPAG

Query:  TMAVGTQQETKQEEPASQNPSANA
        TMAVGTQQETKQEEPASQNPSANA
Subjt:  TMAVGTQQETKQEEPASQNPSANA

A0A5A7V9H6 Putative transmembrane protein5.4e-60100Show/hide
Query:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT
        MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT
Subjt:  MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGT

Query:  MAVGTQQETKQEEPASQNPSANA
        MAVGTQQETKQEEPASQNPSANA
Subjt:  MAVGTQQETKQEEPASQNPSANA

A0A6J1CRZ5 uncharacterized protein LOC1110140301.2e-4379.67Show/hide
Query:  MSFPIEQQSP--PGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA
        MS PIEQQSP  PG+QQ Y GH  +GSVGPVIGVLVVIIVFAVVAVVVGRLCSG++IMGYGHFDLESWAETKCSSCIDGRI+PPPPR + S A  ++   
Subjt:  MSFPIEQQSP--PGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA

Query:  GTMAVGTQQETKQEEPASQNPSA
         TMAV TQQETKQEEPASQNPSA
Subjt:  GTMAVGTQQETKQEEPASQNPSA

A0A6J1KK79 uncharacterized protein LOC1114960288.9e-3976.98Show/hide
Query:  MSFPIEQQSP--PGLQQNYVGHPGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLP
        MS PI+QQSP  PG+QQ Y GH  S GSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLE WAE KCSSCIDGRI+ P PRV+ STAAA SLP
Subjt:  MSFPIEQQSP--PGLQQNYVGHPGS-GSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLP

Query:  AGTMAVGTQQETKQEEPASQNPSANA
        A TM+V    +T+Q+EPASQNP  NA
Subjt:  AGTMAVGTQQETKQEEPASQNPSANA

A0A6J5W971 Uncharacterized protein5.1e-2654.1Show/hide
Query:  MSFPIEQQSPPG--LQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA
        MS P++QQ PP   LQQN   H   GS+G V+ VLVV+I+  VVAVV+GRLCSGRSIMGYGH+DLESWAETKCSSCIDGRI PP  R + S ++ S+   
Subjt:  MSFPIEQQSPPG--LQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPA

Query:  GTMAVGTQQETKQEEPASQNPS
             G++ + +++ P +  P+
Subjt:  GTMAVGTQQETKQEEPASQNPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein6.6e-1837.86Show/hide
Query:  SFPIEQQSPPGLQ----QNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITP--------PPPR--VD
        S P+  Q PP  +     + V   G+ ++GP I V +V+ V  V+A V+GRLCSG++I+GYG +D+E WAE++C SCIDG I P        PPPR  + 
Subjt:  SFPIEQQSPPGLQ----QNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITP--------PPPR--VD

Query:  ASTAAASSLPAGTMA------VGTQQETKQEEPASQNPSA
         +++  S+   G +A       G +Q++   EP  Q PS+
Subjt:  ASTAAASSLPAGTMA------VGTQQETKQEEPASQNPSA

AT3G57500.1 unknown protein1.0e-0743.21Show/hide
Query:  SVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI-------TPPPPRVDASTAAASSLPA
        S+  ++ VL VI + +V+A V  RLC GR +   G  D+E W E KC SCID  I       +PPPP   A TA   S PA
Subjt:  SVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRI-------TPPPPRVDASTAAASSLPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTCCCAATTGAACAACAATCTCCGCCGGGATTGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCCTCGTCGTCATCAT
TGTGTTTGCCGTCGTCGCCGTCGTTGTGGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGTCATTTCGACTTGGAGAGCTGGGCGGAGACAAAATGTTCCTCTT
GCATTGACGGAAGGATTACCCCACCACCGCCGAGGGTCGATGCCTCCACCGCCGCTGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCAGCAAGAAACTAAG
CAAGAAGAACCAGCTTCGCAAAACCCATCTGCCAACGCTTGA
mRNA sequenceShow/hide mRNA sequence
TATTATTTAAAAAGCAAAAAGAAAGGCACAATCTGGGAAAGAGATTGGACTTTTTAACACTCCCAAAGATTCCAACTTTTCTGATTACGTTGCCTTTTTCTTTTCGTCCT
TTTACAGTGCTCAGGGTTCTTATTGTTTCCATCAAAATTACAGTAAAAGAAACATCTTTTTCTCTATTGGTCACTCTTTTGCCCTTCTCTTCTTCTTTACTCCATCTTTG
ATATCTTCTCGCCATTACAGAGTGACTTTGTTTTCTTCAGGTTCGGATTTTGCTGGTAAAAAGAAACGTGTAAATCTTGTGGCCGTCGCCGGAGCATTACATTAGAGCTC
TTGCTCCGGCCAAATGTCATTCCCAATTGAACAACAATCTCCGCCGGGATTGCAGCAAAATTATGTCGGCCATCCGGGTAGCGGCTCCGTCGGTCCGGTCATTGGAGTCC
TCGTCGTCATCATTGTGTTTGCCGTCGTCGCCGTCGTTGTGGGGCGGCTGTGCTCGGGAAGAAGCATAATGGGCTACGGTCATTTCGACTTGGAGAGCTGGGCGGAGACA
AAATGTTCCTCTTGCATTGACGGAAGGATTACCCCACCACCGCCGAGGGTCGATGCCTCCACCGCCGCTGCCTCCTCTCTCCCGGCAGGGACAATGGCGGTCGGAACCCA
GCAAGAAACTAAGCAAGAAGAACCAGCTTCGCAAAACCCATCTGCCAACGCTTGATTTCTAAGATGGAAATCGTTGATAATTGGATTATTAGCTCAAAATTTTCTCTGCA
ATTTTCATTTTTTCCCCTTCATTTGATTCTTTTTTCTTCCGCTGTCAGAATTAGAAAATTTGTGAAACTCTCTCTTAATTGTAATGCCATTTTTCTGTCAGCTTTTCTCC
ATCAAGTTCGGAAGTTTGATTTTCAGTTTTAGTATCTATTGCGCTTTAGAGAGAATGTGTTGTTTGATCGAAATTTTGGTCAAGAGCTTCTTGTGTTTGAATTCAC
Protein sequenceShow/hide protein sequence
MSFPIEQQSPPGLQQNYVGHPGSGSVGPVIGVLVVIIVFAVVAVVVGRLCSGRSIMGYGHFDLESWAETKCSSCIDGRITPPPPRVDASTAAASSLPAGTMAVGTQQETK
QEEPASQNPSANA