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IVF0015223 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015223
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr01:8810067..8810234
RNA-Seq ExpressionIVF0015223
SyntenyIVF0015223
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048777.1 retrotransposon protein [Cucumis melo var. makuwa]8.01e-30100Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]1.26e-2989.09Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYC+D+DDVDEGDS YAT TASEDI YIETTNEWSQWRD+LAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
KAA0058871.1 retrotransposon protein [Cucumis melo var. makuwa]1.31e-2992.73Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDD DEGDSTY T TASEDIQYIETTNEWSQWRDDLAESMFT+WQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.31e-2990.91Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYC+D+DD DEGDSTYAT TASEDIQYIETTNEWSQWRDDLAESMFT+WQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
TYK05336.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-3094.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDD DEGDSTYAT TASEDIQYIETTNEWSQWRDDLAESMFTDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
TrEMBL top hitse value%identityAlignment
A0A5A7SMG5 Retrotransposon protein1.3e-2194.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYAT TASEDIQYIETTNEWSQWRDDLAES+ TDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
A0A5A7ST53 Retrotransposon protein9.9e-2294.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDD DEGDSTYAT TASEDIQYIETTNEWSQWRDDLAESMFTDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
A0A5A7U3B3 Retrotransposon protein2.3e-23100Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
A0A5D3C0Q5 Retrotransposon protein1.3e-2194.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDDVDEGDSTYAT TASEDIQYIETTNEWSQWRDDLAES+ TDWQLRNA
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
A0A5D3C4P9 Retrotransposon protein9.9e-2294.55Show/hide
Query:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
        MTYCEDVDD DEGDSTYAT TASEDIQYIETTNEWSQWRDDLAESMFTDWQLRN+
Subjt:  MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGAGGACGTTGACGACGTGGACGAGGGGGACTCTACATACGCGACGATCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGAGGACGTTGACGACGTGGACGAGGGGGACTCTACATACGCGACGATCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGAATCGATGTTCACCGATTGGCAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCEDVDDVDEGDSTYATITASEDIQYIETTNEWSQWRDDLAESMFTDWQLRNA