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IVF0015234 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015234
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr08:22386412..22386825
RNA-Seq ExpressionIVF0015234
SyntenyIVF0015234
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043323.1 hypothetical protein E6C27_scaffold110G002340 [Cucumis melo var. makuwa]4.96e-1854.46Show/hide
Query:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI
        MT  LE EVKEHKDES+++K                     R QSPL++HL+GLIEP++DESLTGP  VDS  +EVGTS T V K  EQSL  ST LEEI
Subjt:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI

Query:  R
        R
Subjt:  R

KAA0044959.1 hypothetical protein E6C27_scaffold74G002650 [Cucumis melo var. makuwa]1.41e-1853.47Show/hide
Query:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI
        MTP LE EVKEHKDES++ K+    R  +R          ++ +SPL++HL+GLIE  +DESLTGP  VDS  +EVGTS TPV K  +QSL  S  LEEI
Subjt:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI

Query:  R
        R
Subjt:  R

KAA0060401.1 hypothetical protein E6C27_scaffold22G002130 [Cucumis melo var. makuwa]7.09e-1850.89Show/hide
Query:  MTPILEREVKEHKDESEATK-----------AIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQ
        MTP LE EVKEHKDES+++K           A V+G +        + +    + SPLDDHL+GLIE  +DESLTGP  VDS  +EVGTS TPV K  EQ
Subjt:  MTPILEREVKEHKDESEATK-----------AIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQ

Query:  SLHSSTFLEEIR
        SLH    L+EIR
Subjt:  SLHSSTFLEEIR

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]1.31e-2260.78Show/hide
Query:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE
        M P LE EVKEHKDES+++K+ +   R L+R  RY+V+I  E  +SPL+DHL+GLIEP++DESLTGP  VDS  +EVGTS TPV K  EQSL  S  LEE
Subjt:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE

Query:  IR
        IR
Subjt:  IR

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]1.31e-2260.78Show/hide
Query:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE
        M P LE EVKEHKDES+++K+ +   R L+R  RY+V+I  E  +SPL+DHL+GLIEP++DESLTGP  VDS  +EVGTS TPV K  EQSL  S  LEE
Subjt:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE

Query:  IR
        IR
Subjt:  IR

TrEMBL top hitse value%identityAlignment
A0A5A7TIV2 Uncharacterized protein5.6e-1554.46Show/hide
Query:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI
        MT  LE EVKEHKDES+++K                     R QSPL++HL+GLIEP++DESLTGP  VDS  +EVGTS T V K  EQSL  ST LEEI
Subjt:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI

Query:  R
        R
Subjt:  R

A0A5A7TUP1 Uncharacterized protein1.3e-1453.47Show/hide
Query:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI
        MTP LE EVKEHKDES++ K+    R  +R          ++ +SPL++HL+GLIE  +DESLTGP  VDS  +EVGTS TPV K  +QSL  S  LEEI
Subjt:  MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEI

Query:  R
        R
Subjt:  R

A0A5A7V4F4 PMD domain-containing protein6.4e-1960.78Show/hide
Query:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE
        M P LE EVKEHKDES+++K+ +   R L+R  RY+V+I  E  +SPL+DHL+GLIEP++DESLTGP  VDS  +EVGTS TPV K  EQSL  S  LEE
Subjt:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE

Query:  IR
        IR
Subjt:  IR

A0A5D3BRA8 PMD domain-containing protein6.4e-1960.78Show/hide
Query:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE
        M P LE EVKEHKDES+++K+ +   R L+R  RY+V+I  E  +SPL+DHL+GLIEP++DESLTGP  VDS  +EVGTS TPV K  EQSL  S  LEE
Subjt:  MTPILEREVKEHKDESEATKA-IVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEE

Query:  IR
        IR
Subjt:  IR

A0A5D3DEN0 Uncharacterized protein1.3e-1450.89Show/hide
Query:  MTPILEREVKEHKDESEAT-----------KAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQ
        MTP LE EVKEHKDES+++           KA V+G +        + +    + SPLDDHL+GLIE  +DESLTGP  VDS  +EVGTS TPV K  EQ
Subjt:  MTPILEREVKEHKDESEAT-----------KAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQ

Query:  SLHSSTFLEEIR
        SLH    L+EIR
Subjt:  SLHSSTFLEEIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCTATCCTCGAGAGGGAGGTGAAGGAGCACAAAGATGAGAGTGAAGCAACAAAAGCGATCGTCGTTGGACGAGACCTGCAAAGAATCCAAAGGTATCGGGTGAT
GATTCATGCAGAAAGGGTTCAATCACCTTTGGACGATCATCTTCAAGGACTTATAGAACCAAACAATGATGAATCTTTGACAGGGCCTCAAGAAGTTGATTCGATAAATA
AGGAAGTTGGTACCTCAATGACACCAGTTGCCAAATCAATTGAACAATCCTTACATTCTTCTACTTTTCTCGAAGAGATTCGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCTATCCTCGAGAGGGAGGTGAAGGAGCACAAAGATGAGAGTGAAGCAACAAAAGCGATCGTCGTTGGACGAGACCTGCAAAGAATCCAAAGGTATCGGGTGAT
GATTCATGCAGAAAGGGTTCAATCACCTTTGGACGATCATCTTCAAGGACTTATAGAACCAAACAATGATGAATCTTTGACAGGGCCTCAAGAAGTTGATTCGATAAATA
AGGAAGTTGGTACCTCAATGACACCAGTTGCCAAATCAATTGAACAATCCTTACATTCTTCTACTTTTCTCGAAGAGATTCGTTAA
Protein sequenceShow/hide protein sequence
MTPILEREVKEHKDESEATKAIVVGRDLQRIQRYRVMIHAERVQSPLDDHLQGLIEPNNDESLTGPQEVDSINKEVGTSMTPVAKSIEQSLHSSTFLEEIR