CuGenDBv2

Gene ID	IVF0015289
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	CCHC-type domain-containing protein
Genome location	chr08:25291884..25292234
RNA-Seq Expression	IVF0015289
Synteny	IVF0015289
Gene Ontology terms	GO:0006278 - RNA-dependent DNA biosynthetic process (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0003964 - RNA-directed DNA polymerase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0049683.1 uncharacterized protein E6C27_scaffold76G00220 [Cucumis melo var. makuwa]

1.61e-60

88.6

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAK+VW+ LQKKYDTEEA SKKYAVSRYLRYQMTDDR VEAQSHEIQKIAHEII+EGMPLDDQFQV +IIDKLPLLWKDFKNTLR+KTKEFSLE+LIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKK
        RL+IEEEA+K DKK
Subjt:  RLKIEEEAKKRDKK

KAA0050409.1 hypothetical protein E6C27_scaffold1166G00260 [Cucumis melo var. makuwa]

3.90e-63

96.49

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKL LLWKDFKNTLRHKTKEFSLENL T
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKK
        RL+IEEEAKK DKK
Subjt:  RLKIEEEAKKRDKK

KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]

8.26e-63

90.18

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAK+VW+ALQKKYDTEEAGSKKYAVSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRD
        RL+IEEEA+K D
Subjt:  RLKIEEEAKKRD

KAA0065758.1 uncharacterized protein E6C27_scaffold37G00490 [Cucumis melo var. makuwa]

1.55e-59

85.09

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAK+VW+ LQKKYDTE AGSKKYAVSRYLRYQMTDD+ VEA SHEIQKIAHEII++GMPLDDQFQV +IIDKLPLLWKDFKN LRHKTKEFSLE+LI 
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKK
        RL+IEEEA+K DKK
Subjt:  RLKIEEEAKKRDKK

TYJ98000.1 hypothetical protein E5676_scaffold487G00230 [Cucumis melo var. makuwa]

5.35e-67

100

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKKK
        RLKIEEEAKKRDKKK
Subjt:  RLKIEEEAKKRDKKK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UA92 Uncharacterized protein

1.1e-51

95.65

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKL LLWKDFKNTLRHKTKEFSLENL T
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKKK
        RL+IEEEAKK DKK+
Subjt:  RLKIEEEAKKRDKKK

A0A5A7UYY4 Uncharacterized protein

1.2e-48

90.18

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAK+VW+ALQKKYDTEEAGSKKYAVSRYLRYQMTDD+SVEAQSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRD
        RL+IEEEA+K D
Subjt:  RLKIEEEAKKRD

A0A5D3BDS3 Uncharacterized protein

8.4e-55

100

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKKK
        RLKIEEEAKKRDKKK
Subjt:  RLKIEEEAKKRDKKK

A0A5D3CPF2 Uncharacterized protein

9.9e-48

87.83

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTTAK+VW+ LQKKYDTEEA SKKYAVSRYLRYQMTDDR VEAQSHEIQKIAHEII+EGMPLDDQFQV +IIDKLPLLWKDFKNTLR+KTKEFSLE+LIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKKK
        RL+IEEEA+K DKK+
Subjt:  RLKIEEEAKKRDKKK

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein

1.7e-47

86.96

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Query:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT
        MTT K+VW+ALQKKYDT+EA SKKYAVSRYLRYQMTDD+SVE QSHEIQKIAHEII+EGMPLDDQFQV +IIDKLP LWKDFKNTLRHKTKEFSLE+LIT
Subjt:  MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLIT

Query:  RLKIEEEAKKRDKKK
        RLKIEEEA+K DKK+
Subjt:  RLKIEEEAKKRDKKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G00980.1 zinc knuckle (CCHC-type) family protein

6.2e-10

33.33

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Query:  AKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLK
        AK++W+ L+  Y  +E+ SK+  V +Y+ ++M ++R +  Q     KIA  I++ GM LD+ F V+ II K P  W+ F   L  + +   +  L+ R+K
Subjt:  AKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLK

Query:  IEEEAKKRDKK
         EEE  +   K
Subjt:  IEEEAKKRDKK

Sequences

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CDS sequence

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ATGACTACTGCAAAACAAGTGTGGGAAGCGCTACAAAAGAAGTACGATACTGAAGAAGCAGGGTCAAAGAAGTACGCTGTCAGCCGATACTTGAGATATCAAATG
ACTGATGACAGATCTGTGGAGGCACAGTCACATGAAATCCAGAAAATAGCTCACGAGATTATCAATGAAGGTATGCCACTCGATGATCAATTCCAAGTTACTATT
ATTATTGATAAATTACCTCTACTGTGGAAGGATTTCAAGAACACTCTAAGGCACAAAACCAAAGAGTTCTCACTAGAAAACCTAATCACGAGGCTAAAGATAGAG
GAGGAAGCAAAGAAGCGTGATAAAAAAAAGAGGTGA

mRNA sequence

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Protein sequence

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MTTAKQVWEALQKKYDTEEAGSKKYAVSRYLRYQMTDDRSVEAQSHEIQKIAHEIINEGMPLDDQFQVTIIIDKLPLLWKDFKNTLRHKTKEFSLENLITRLKIE
EEAKKRDKKKR

IVF0015289 (gene) of Melon (IVF77) v1 genome