CuGenDBv2

Gene ID	IVF0015290
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	F-box/LRR-repeat protein
Genome location	chr12:25219646..25220767
RNA-Seq Expression	IVF0015290
Synteny	IVF0015290
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR017451 - F-box associated interaction domain IPR036047 - F-box-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KGN64030.1 hypothetical protein Csa_013491 [Cucumis sativus]

4.68e-110

59.74

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Query:  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDE
        R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGL          V RHS+KN E
Subjt:  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDE

Query:  LFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------N
        L VEILAF TSL DQDG   +VQSQWR V S+STTYKM+RH                                 NEKFEEL +                N
Subjt:  LFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------N

Query:  GKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS
        GKLY+SHYVTADS YHVLMMNGKGLWE PFFI+IPRFYKGST+              GKILCLFYSFLLVL+DTK+ KLEKL  V+  VK+SFRIC MDS
Subjt:  GKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS

Query:  IHFGSLPNILAGK
        IHF SLPNILAG 
Subjt:  IHFGSLPNILAGK

TYJ98917.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]

1.39e-232

88.5

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Query:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
Subjt:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
        NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH

Query:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
        RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEEL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Subjt:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK

Query:  GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
        GST+              GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
Subjt:  GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]

1.05e-51

35.82

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Query:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN
        +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CN
Subjt:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN

Query:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR
        GLL +L  KR        + ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI AF        G+  +V +   
Subjt:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR

Query:  HVVSISTTYKMHRHGTYFNGAIYWVG-EGERSDSSAKNVYVLWRLNVTNEKFEELCV-------------NGKLYLSHYVTADSMYHVLMMNGKGLWETP
          V    +  +  HG YFNG +YWV  + +  DSS   +Y   RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Subjt:  HVVSISTTYKMHRHGTYFNGAIYWVG-EGERSDSSAKNVYVLWRLNVTNEKFEELCV-------------NGKLYLSHYVTADSMYHVLMMNGKGLWETP

Query:  FFISIPRFY------------------KGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
        F IS PR                    K    GKILCL     L+L+D K+   E L     +V+K   + H+DS +F SLPNILAG 
Subjt:  FFISIPRFY------------------KGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

XP_004137594.1 F-box protein At5g65850 [Cucumis sativus]

9.22e-94

73.43

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Query:  GNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGI
          +IIDSELPSDILLQILL LQPFS LFTCRLVSK WN CISSFKF+SNLFITQIS  R RRR+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGI
Subjt:  GNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQIS--RCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGI

Query:  VNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKM
        VN CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGL          V RHS+KN EL VEILAF TSL DQDG   +VQSQWR V S+STTYKM
Subjt:  VNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKM

Query:  HRHGTYF
        +RHGTYF
Subjt:  HRHGTYF

XP_008447090.1 PREDICTED: F-box/LRR-repeat protein At2g43260-like [Cucumis melo]

1.55e-232

88.5

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Query:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
Subjt:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
        NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH

Query:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
        RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEEL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Subjt:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK

Query:  GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
        GST+              GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
Subjt:  GSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQ77 Uncharacterized protein

1.4e-89

59.94

Show/hide

Query:  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDE
        R+RNR  CVDL+P   +G+NL+GSFKLH SW SSSTGIVN CNG LCILN KRVA+LNPMTNEYMELPS T+Y+ SVYGL          V RHS+KN E
Subjt:  RSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDE

Query:  LFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------N
        L VEILAF TSL DQDG   +VQSQWR V S+STTYKM+RH                                 NEKFEEL +                N
Subjt:  LFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------N

Query:  GKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS
        GKLY+SHYVTADS YHVLMMNGKGLWE PFFI+IPRFYKGST+              GKILCLFYSFLLVL+DTK+ KLEKL  V+  VK+SFRIC MDS
Subjt:  GKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQ--------------GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDS

Query:  IHFGSLPNILAG
        IHF SLPNILAG
Subjt:  IHFGSLPNILAG

A0A1S3B0Q6 putative F-box protein At3g21120

2.3e-44

35.66

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Query:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN
        +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CN
Subjt:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN

Query:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR
        GLL +L  KR        + ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI AF             +   W 
Subjt:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR

Query:  HVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVYVLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP
          V    +  +  HG YFNG +YWV  + +  DSS   +Y   RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Subjt:  HVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVYVLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP

Query:  FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAG
        F IS PR                    K    GKILCL     L+L+D K+   E L     +V+K   + H+DS +F SLPNILAG
Subjt:  FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAG

A0A1S3BGK6 F-box/LRR-repeat protein At2g43260-like

3.6e-183

88.5

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Query:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
Subjt:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
        NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH

Query:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
        RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEEL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Subjt:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK

Query:  GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
        GST              +GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
Subjt:  GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

A0A5D3BIH1 F-box/LRR-repeat protein

3.6e-183

88.5

Show/hide

Query:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
Subjt:  MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
        NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL          VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGL----------VARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMH

Query:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
        RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEEL +                NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK
Subjt:  RHGTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKFEELCV----------------NGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYK

Query:  GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
        GST              +GKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK
Subjt:  GST--------------QGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAGK

A0A5D3CM94 Putative F-box protein

1.7e-44

35.92

Show/hide

Query:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN
        +SE P D ++Q++L   P   L +CRLV K+WN  + + KFD +LFI+    C  R+   L+CVD +P  SEG+N VGSF  HP  S SSSS  I+N CN
Subjt:  DSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHP--SWSSSSTGIVNICN

Query:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR
        GLL +L  KR        + ILNPMTNEY + P+              YGL          +AR SF+ DE    VEI AF        G+  +V +   
Subjt:  GLLCILNGKR--------VAILNPMTNEYMELPSRTEYQSSV------YGL----------VARHSFKNDE--LFVEILAFDTSLADQDGNQNEVQSQWR

Query:  HVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVYVLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP
          V    +  +  HG YFNG +YWV  + +  DSS   +Y   RL++ NE  E++               +G LYL+  V+ ++ Y V  M     W   
Subjt:  HVVSISTTYKMHRHGTYFNGAIYWV-GEGERSDSSAKNVYVLWRLNVTNEKFEEL-------------CVNGKLYLSHYVTADSMYHVLMMNGKGLWETP

Query:  FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAG
        F IS PR                    K    GKILCL     L+L+D K+   E L     +V+K   + H+DS +F SLPNILAG
Subjt:  FFISIPRF------------------YKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNILAG

SwissProt top hits

e value

%identity

Alignment

Q9FT50 Putative F-box protein At3g52320

2.6e-05

24.05

Show/hide

Query:  ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------RRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        E+P ++L+ IL+ L P   L   + VSK W   I+S  F +  F      C          +S+  L     +         V     H +       +V
Subjt:  ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------RRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQSQWRHVVSISTTYK---MHRH
        N   GLLC   G+RV + NP T + +ELP     +++V+       F ++     LF E+    T + ++       V + WR+  S  T ++    +  
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQSQWRHVVSISTTYK---MHRH

Query:  GTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF
        G   +G +Y+     R+D+   N  VL   ++++E+F
Subjt:  GTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF

Arabidopsis top hits

e value

%identity

Alignment

AT3G52320.1 F-box and associated interaction domains-containing protein

1.8e-06

24.05

Show/hide

Query:  ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------RRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV
        E+P ++L+ IL+ L P   L   + VSK W   I+S  F +  F      C          +S+  L     +         V     H +       +V
Subjt:  ELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRC--------RRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIV

Query:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQSQWRHVVSISTTYK---MHRH
        N   GLLC   G+RV + NP T + +ELP     +++V+       F ++     LF E+    T + ++       V + WR+  S  T ++    +  
Subjt:  NICNGLLCILNGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKND----ELFVEILAFDTSL-ADQDGNQNEVQSQWRHVVSISTTYK---MHRH

Query:  GTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF
        G   +G +Y+     R+D+   N  VL   ++++E+F
Subjt:  GTYFNGAIYWVGEGERSDSSAKNVYVLWRLNVTNEKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAATAACATAATAGATTCAGAGCTTCCATCCGATATTCTTCTCCAAATATTGTTGTTGCTTCAACCATTTTCCAAATTATTCACTTGCAGGCTAGTGAGTAAAAA
TTGGAACAAATGCATTTCAAGTTTTAAGTTTGATTCCAACCTTTTCATTACCCAAATTTCTCGTTGTCGTAGACGTAGTCGTAATCGCCTTCACTGTGTGGATTTGAATC
CTAACCGTTCGGAAGGGGTGAATCTTGTTGGGTCATTTAAGTTGCATCCTTCATGGTCCTCCTCCTCTACTGGAATTGTCAATATTTGTAATGGACTTCTTTGTATCTTG
AATGGCAAACGTGTTGCAATACTAAATCCTATGACAAATGAGTACATGGAGCTTCCGAGTAGGACCGAATATCAGTCGTCCGTCTATGGACTTGTAGCAAGACATTCGTT
CAAAAATGATGAGTTGTTTGTAGAGATTTTAGCATTTGACACAAGTTTGGCGGATCAAGATGGGAATCAGAATGAGGTTCAAAGTCAGTGGAGACACGTAGTTAGCATAA
GTACAACCTATAAAATGCATCGCCATGGTACTTACTTTAATGGAGCCATCTATTGGGTTGGAGAAGGAGAGAGGTCTGATTCATCGGCCAAAAATGTGTATGTGTTGTGG
CGTTTGAATGTAACAAATGAGAAATTTGAAGAACTTTGTGTTAATGGAAAATTGTATCTAAGTCATTACGTGACGGCGGATTCTATGTATCATGTGTTGATGATGAATGG
AAAAGGCTTGTGGGAGACACCATTTTTTATTAGCATACCAAGGTTTTACAAAGGTTCGACACAAGGAAAGATTTTGTGTCTTTTCTACTCGTTTCTTTTAGTCTTGTTTG
ATACCAAGAGTGGGAAGTTGGAGAAACTGGATTATGTCGAGGAGGAAGTTAAGAAATCTTTTCGCATTTGTCATATGGACTCCATCCATTTTGGTTCTCTCCCCAACATT
TTGGCAGGGAAGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

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MGNNIIDSELPSDILLQILLLLQPFSKLFTCRLVSKNWNKCISSFKFDSNLFITQISRCRRRSRNRLHCVDLNPNRSEGVNLVGSFKLHPSWSSSSTGIVNICNGLLCIL
NGKRVAILNPMTNEYMELPSRTEYQSSVYGLVARHSFKNDELFVEILAFDTSLADQDGNQNEVQSQWRHVVSISTTYKMHRHGTYFNGAIYWVGEGERSDSSAKNVYVLW
RLNVTNEKFEELCVNGKLYLSHYVTADSMYHVLMMNGKGLWETPFFISIPRFYKGSTQGKILCLFYSFLLVLFDTKSGKLEKLDYVEEEVKKSFRICHMDSIHFGSLPNI
LAGK

IVF0015290 (gene) of Melon (IVF77) v1 genome