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IVF0015292 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015292
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:12249880..12250065
RNA-Seq ExpressionIVF0015292
SyntenyIVF0015292
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037840.1 retrotransposon protein [Cucumis melo var. makuwa]3.53e-32100Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS
        MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS

KAA0038275.1 retrotransposon protein [Cucumis melo var. makuwa]2.83e-2883.61Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN ++ YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

KAA0048149.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.46e-2985.25Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN +M+YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

TYJ98396.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.26e-2781.97Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACC LYNLIN +M YIDELD+E DGDSTHATT GD+ITYIEPSN WTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

XP_008444024.1 PREDICTED: uncharacterized protein LOC103487473 [Cucumis melo]2.29e-2883.61Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN ++ YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

TrEMBL top hitse value%identityAlignment
A0A1S3B9E4 uncharacterized protein LOC1034874738.4e-2283.61Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN ++ YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

A0A5A7TA66 Retrotransposon protein8.4e-2283.61Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN ++ YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

A0A5A7U3X6 Putative nuclease HARBI11.7e-2285.25Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACCLL+NLIN +M+YI+ELDDEDDGDSTHATT GD+ITYIEPSNEWTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

A0A5D3BH76 Putative nuclease HARBI19.3e-2181.97Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME
        MACC LYNLIN +M YIDELD+E DGDSTHATT GD+ITYIEPSN WTEWRD LASSMF E
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME

A0A5D3DV28 Retrotransposon protein1.2e-25100Show/hide
Query:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS
        MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS
Subjt:  MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTGTCTCCTTTATAATTTAATAAATTGGAAGATGAATTACATCGACGAATTGGATGACGAAGATGATGGTGACTCGACACACGCAACTACTCGTGGGGATGA
AATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATACGCTTGCTTCGTCAATGTTTATGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTGTCTCCTTTATAATTTAATAAATTGGAAGATGAATTACATCGACGAATTGGATGACGAAGATGATGGTGACTCGACACACGCAACTACTCGTGGGGATGA
AATCACATACATTGAGCCCTCAAACGAATGGACTGAATGGCGTGATACGCTTGCTTCGTCAATGTTTATGGAATGA
Protein sequenceShow/hide protein sequence
MACCLLYNLINWKMNYIDELDDEDDGDSTHATTRGDEITYIEPSNEWTEWRDTLASSMFME