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IVF0015320 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015320
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:22614920..22615216
RNA-Seq ExpressionIVF0015320
SyntenyIVF0015320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039561.1 hypothetical protein E6C27_scaffold744G00310 [Cucumis melo var. makuwa]1.53e-1245.98Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQES
        MAPR R R  RQVT  VP T S N+ Q S+E+S+NP+  + +  ++ M DR  Q+           +DKRF+IERL+ALGA TF+E+
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQES

KAA0041782.1 uncharacterized protein E6C27_scaffold67G001450 [Cucumis melo var. makuwa]1.25e-57100Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG
        MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG

KAA0046177.1 uncharacterized protein E6C27_scaffold376G00360 [Cucumis melo var. makuwa]8.39e-1557.53Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETF
        M PRGRSR+VR++  DVP   S N  QAS+E+SSN +  VG+R  EGM  RL  K+DKRF I+RLKAL   TF
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETF

KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]3.66e-1251.19Show/hide
Query:  GRSRQVR---QVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQ
        G SR+VR   QV   VP TR  N AQAS ++SSNPH SV +  +E M DR  Q+           +DKRF IERLKALGA TF+
Subjt:  GRSRQVR---QVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQ

TYK29193.1 uncharacterized protein E5676_scaffold880G00030 [Cucumis melo var. makuwa]1.55e-1766.67Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLK
        M PRGR RQVRQV  DVP TRS N AQA  E+SSNPH  VG+  +EGM D   QK+DKRFSIER K
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLK

TrEMBL top hitse value%identityAlignment
A0A5A7TVM1 Uncharacterized protein1.7e-0851.19Show/hide
Query:  GRSRQV---RQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQ
        G SR+V   RQV   VP TR  N AQAS ++SSNPH SV +  +E M DR  Q+           +DKRF IERLKALGA TF+
Subjt:  GRSRQV---RQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQ

A0A5A7TWA5 Uncharacterized protein2.4e-1057.53Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETF
        M PRGRSR+VR++  DVP   S N  QAS+E+SSN +  VG+R  EGM  RL  K+DKRF I+RLKAL   TF
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETF

A0A5D3BUF6 Uncharacterized protein7.7e-0945.98Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQES
        MAPR R R  RQVT  VP T S N+ Q S+E+S+NP+  + +  ++ M DR  Q+           +DKRF+IERL+ALGA TF+E+
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQK-----------IDKRFSIERLKALGAETFQES

A0A5D3DTR2 Retrotrans_gag domain-containing protein3.6e-43100Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG
        MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWG

A0A5D3DZK7 Uncharacterized protein2.5e-1266.67Show/hide
Query:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLK
        M PRGR RQVRQV  DVP TRS N AQA  E+SSNPH  VG+  +EGM D   QK+DKRFSIER K
Subjt:  MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCACGAGGAAGGTCGAGACAAGTCAGGCAAGTAACAAGAGATGTTCCAACAACCAGGAGCTTTAATGAAGCGCAAGCATCAGACGAAGTGTCAAGTAACCCACA
CGGTTCGGTGGGAAAAAGGCATAAGGAAGGAATGGTGGATCGCCTCCTTCAGAAGATAGATAAAAGGTTTAGCATCGAGAGGCTAAAAGCATTGGGGGCAGAAACCTTTC
AAGAATCACTAATCCGGCTGATGAGAAAAGTGGTTAAGTTTGATAGAAAAGTGTTTTGGGGTGATGGACTGCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCACCACGAGGAAGGTCGAGACAAGTCAGGCAAGTAACAAGAGATGTTCCAACAACCAGGAGCTTTAATGAAGCGCAAGCATCAGACGAAGTGTCAAGTAACCCACA
CGGTTCGGTGGGAAAAAGGCATAAGGAAGGAATGGTGGATCGCCTCCTTCAGAAGATAGATAAAAGGTTTAGCATCGAGAGGCTAAAAGCATTGGGGGCAGAAACCTTTC
AAGAATCACTAATCCGGCTGATGAGAAAAGTGGTTAAGTTTGATAGAAAAGTGTTTTGGGGTGATGGACTGCACTGA
Protein sequenceShow/hide protein sequence
MAPRGRSRQVRQVTRDVPTTRSFNEAQASDEVSSNPHGSVGKRHKEGMVDRLLQKIDKRFSIERLKALGAETFQESLIRLMRKVVKFDRKVFWGDGLH