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IVF0015336 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015336
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr03:2535691..2535915
RNA-Seq ExpressionIVF0015336
SyntenyIVF0015336
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041960.1 reverse transcriptase [Cucumis melo var. makuwa]1.32e-3790.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNSSENSGETVPKEIMRVLEKY DV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAEL K
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

KAA0050675.1 uncharacterized protein E6C27_scaffold673G001580 [Cucumis melo var. makuwa]2.98e-3790.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPL SSENSGETVPKEIMRVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAEL K
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

KAA0055559.1 uncharacterized protein E6C27_scaffold222G00360 [Cucumis melo var. makuwa]8.61e-3790.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNS ENSGETVPKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAELWK
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

KAA0057352.1 Asp_protease_2 domain-containing protein [Cucumis melo var. makuwa]3.54e-3788.89Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAEL
        +AIPLNSSENSGETVPKEIM VLEKYRDVIPDSLPKSLPPRRMIDHE++LVP AKPP KN+YRMAPPEL EL
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAEL

TYK01361.1 uncharacterized protein E5676_scaffold29G00470 [Cucumis melo var. makuwa]4.94e-3890.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNSSENSGET+PKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAELWK
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

TrEMBL top hitse value%identityAlignment
A0A5A7TR40 Polyprotein2.9e-2991.89Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPL SSENSGETVPKEIMRVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPPVKN+YRMAPPELAEL K
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

A0A5A7UQ20 Uncharacterized protein3.5e-3090.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNS ENSGETVPKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAELWK
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

A0A5D3B9T5 Reverse transcriptase domain-containing protein5.0e-2990.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNSSENSGETVPKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAEL K
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

A0A5D3BNI3 Reverse transcriptase domain-containing protein1.6e-3090.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNSSENSGET+PKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAELWK
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

A0A5D3C9P8 Reverse transcriptase5.0e-2990.54Show/hide
Query:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK
        MAIPLNSSENSGETVPKEI+RVLEKYRDV+PDSLPKSLPPRRMIDHEI+LVP AKPP KN+YRMAPPELAEL K
Subjt:  MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCCACTCAATTCATCAGAGAACTCAGGGGAGACAGTCCCTAAGGAGATTATGCGCGTGCTAGAGAAGTACCGTGATGTGATTCCCGATAGTTTGCCCAAGTC
TTTGCCACCTCGGAGAATGATTGATCATGAGATCAAGTTGGTGCCAAGGGCAAAACCGCCTGTGAAGAATTCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTTGGA
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCCACTCAATTCATCAGAGAACTCAGGGGAGACAGTCCCTAAGGAGATTATGCGCGTGCTAGAGAAGTACCGTGATGTGATTCCCGATAGTTTGCCCAAGTC
TTTGCCACCTCGGAGAATGATTGATCATGAGATCAAGTTGGTGCCAAGGGCAAAACCGCCTGTGAAGAATTCTTATCGTATGGCGCCTCCGGAGTTAGCTGAACTTTGGA
AATAG
Protein sequenceShow/hide protein sequence
MAIPLNSSENSGETVPKEIMRVLEKYRDVIPDSLPKSLPPRRMIDHEIKLVPRAKPPVKNSYRMAPPELAELWK