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IVF0015346 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015346
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionATP-dependent zinc metalloprotease FtsH
Genome locationchr06:17337592..17338163
RNA-Seq ExpressionIVF0015346
SyntenyIVF0015346
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004222 - metalloendopeptidase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsIPR003959 - ATPase, AAA-type, core
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060543.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.44e-35100Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
        MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
PKI77897.1 hypothetical protein CRG98_001689 [Punica granatum]4.88e-3479.49Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
        +D I ALATRRQGIFK+STD LYNA T ERETTLNQLL+ELDGFDTGKGVI LAAT RRDLLDP LLRPG FD +  F
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
TYH05561.1 hypothetical protein ES288_A08G092700v1 [Gossypium darwinii]1.48e-3276.92Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
        +D I ALATRRQGIFK++TD LYNAAT ERETTLNQLL+ELDGFDTGKGVI   AT RRDLLDP LLR G FD   NF
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
TYK00786.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.44e-35100Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
        MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
XP_019242689.1 PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic [Nicotiana attenuata]8.06e-3380Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I ALATRRQGIF +STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRDLLDP LLRPG FD +
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
TrEMBL top hitse value%identityAlignment
A0A022Q7Y5 AAA domain-containing protein1.0e-2582.67Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I ALATRRQGIFK+STDLLYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRDLLDP LLRPG FD +
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
A0A2I4HMZ7 probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic1.3e-2582.67Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I ALATRRQGIFK+STD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRDLLDP LLRPG FD +
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
A0A5A7UX59 Ty3/gypsy retrotransposon protein1.5e-29100Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
        MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
A0A5D3BRA0 Ty3/gypsy retrotransposon protein1.5e-29100Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
        MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRP
A0A7J8WYF3 AAA domain-containing protein2.6e-2680.77Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
        +D I ALATRRQGIFK++TD LYNAAT ERETTLNQLL+ELDGFDTGKGVI LAAT RRDLLDP LLRPG FD + NF
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNF
SwissProt top hitse value%identityAlignment
B4U7U4 ATP-dependent zinc metalloprotease FtsH2.1e-1268.09Show/hide
Query:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        ERE TLNQLLVE+DGFDT +G++++AAT R D+LDP LLRPG FD +
Subjt:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
D0MGU8 ATP-dependent zinc metalloprotease FtsH5.5e-1353.95Show/hide
Query:  MDGIHALA-TRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I A+  +R +GI   + D        ERE TLNQLLVE+DGF+T KGVI++AAT R D+LDP LLRPG FD +
Subjt:  MDGIHALA-TRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
D1CDT8 ATP-dependent zinc metalloprotease FtsH1.6e-1274.47Show/hide
Query:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        ERE TLNQLLVE+DGFD+ +GVI+LAAT R D+LDP LLRPG FD R
Subjt:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
O22993 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic8.7e-2778.67Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRDLLDP LLRPG FD +
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
Q67LC0 ATP-dependent zinc metalloprotease FtsH 14.2e-1356.16Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD
        +D I ALA RR+G+            T ERE T+NQLLVE+DGFD+G+GVI++AAT R D+LDP +LRPG FD
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD
Arabidopsis top hitse value%identityAlignment
AT1G07510.1 FTSH protease 101.8e-1165.96Show/hide
Query:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Subjt:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
AT2G29080.1 FTSH protease 31.8e-1165.96Show/hide
Query:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        ERE+TLNQLLVE+DGF T  GV++LA T R D+LD  LLRPG FD +
Subjt:  ERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
AT3G47060.1 FTSH protease 72.1e-1250.68Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD
        +D I A+A  R G F+  ++        ERE TLNQLL E+DGFD+   VI+L AT R D+LDP L RPG FD
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD
AT4G23940.1 FtsH extracellular protease family6.2e-2878.67Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
        +D I ALATRRQGIFK+++D LYNAAT ERETTLNQLL+ELDGFDTGKGVI L AT RRDLLDP LLRPG FD +
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDER
AT5G58870.1 FTSH protease 93.6e-1250.68Show/hide
Query:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD
        +D I A+A  R G F+         +  ERE TLNQLL E+DGFD+   VI+L AT R D+LDP L RPG FD
Subjt:  MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACT
TCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATG
AAAGGTTCAACTTTTTGATTCATGAATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAATTCATGCCTTGGCGACTAGGCGTCAGGGAATTTTCAAGAAATCTACGGATCTTCTCTACAATGCAGCTACCCTAGAGAGGGAAACCACATTGAACCAACT
TCTTGTAGAGCTTGATGGATTCGATACTGGAAAGGGTGTTATACTTTTAGCTGCCACGACTAGAAGAGATCTGTTAGATCCTCCGCTTCTCCGACCGGGTCCTTTTGATG
AAAGGTTCAACTTTTTGATTCATGAATCATGA
Protein sequenceShow/hide protein sequence
MDGIHALATRRQGIFKKSTDLLYNAATLERETTLNQLLVELDGFDTGKGVILLAATTRRDLLDPPLLRPGPFDERFNFLIHES