; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0015390 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015390
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationchr12:16519712..16520125
RNA-Seq ExpressionIVF0015390
SyntenyIVF0015390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]9.99e-4970Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN L TVKLD+ NYL  KTLALP LKGYKLE HLTGETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
KAA0043233.1 hypothetical protein E6C27_scaffold110G001150 [Cucumis melo var. makuwa]2.81e-51100Show/hide
Query:  MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
        MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
Subjt:  MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]7.82e-5070Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN L TVKLD+ NYL  KTLALP LKGYKLE HLTGETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]3.97e-4869.23Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN LTTVKLD+ NYL  KTLALP LK YKLE HLT ETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
XP_016902205.1 PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]1.42e-4869.23Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN LTTVKLD+ NYL  KTLALP LK YKLE HLT ETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X11.2e-3769.23Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN LTTVKLD+ NYL  KTLALP LK YKLE HLT ETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X41.2e-3769.23Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN LTTVKLD+ NYL  KTLALP LK YKLE HLT ETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
A0A5A7SIT7 Uncharacterized protein1.5e-3870Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN L TVKLD+ NYL  KTLALP LKGYKLE HLTGETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
A0A5A7TIN2 Uncharacterized protein2.5e-38100Show/hide
Query:  MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
        MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
Subjt:  MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT
A0A5D3BCH9 Uncharacterized protein1.5e-3870Show/hide
Query:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT
        PSLS+ GFSN  LNQ+LN L TVKLD+ NYL  KTLALP LKGYKLE HLTGETPCPS  VLSASSSNTT+TEEGA+AT                  WVT
Subjt:  PSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANAT------------------WVT

Query:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
        TD LLLGWLYNSMTP+VAIQLMGFTN +DL
Subjt:  TDFLLLGWLYNSMTPNVAIQLMGFTNSKDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGATGCCGTCACTGCTCCAAGTTTATCTACACCAGGTTTTTCGAATTCTCTCCTAAACCAAGTTTTAAATCATCTGACTACTGTCAAGCTTGATAAAAACAACTA
CCTATCGAGGAAAACCCTTGCTCTCCCAACCCTCAAAGGCTACAAGCTTGAGAGACATCTCACCGGAGAAACGCCATGCCCATCAAAATTGGTCTTGTCGGCGTCTAGCT
CAAACACTACCATGACTGAAGAAGGAGCAAACGCAACTTGGGTGACTACTGATTTTCTGCTGCTCGGATGGCTTTACAATTCCATGACGCCTAATGTAGCCATTCAATTG
ATGGGATTTACAAATTCTAAGGACTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGATGCCGTCACTGCTCCAAGTTTATCTACACCAGGTTTTTCGAATTCTCTCCTAAACCAAGTTTTAAATCATCTGACTACTGTCAAGCTTGATAAAAACAACTA
CCTATCGAGGAAAACCCTTGCTCTCCCAACCCTCAAAGGCTACAAGCTTGAGAGACATCTCACCGGAGAAACGCCATGCCCATCAAAATTGGTCTTGTCGGCGTCTAGCT
CAAACACTACCATGACTGAAGAAGGAGCAAACGCAACTTGGGTGACTACTGATTTTCTGCTGCTCGGATGGCTTTACAATTCCATGACGCCTAATGTAGCCATTCAATTG
ATGGGATTTACAAATTCTAAGGACTTATAG
Protein sequenceShow/hide protein sequence
MVDAVTAPSLSTPGFSNSLLNQVLNHLTTVKLDKNNYLSRKTLALPTLKGYKLERHLTGETPCPSKLVLSASSSNTTMTEEGANATWVTTDFLLLGWLYNSMTPNVAIQL
MGFTNSKDL