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IVF0015394 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015394
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Genome locationchr06:20488079..20489105
RNA-Seq ExpressionIVF0015394
SyntenyIVF0015394
Gene Ontology termsGO:0010258 - NADH dehydrogenase complex (plastoquinone) assembly (biological process)
GO:0009570 - chloroplast stroma (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025435.1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 [Cucumis melo var. makuwa]2.87e-14399.53Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQ ETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_004152910.2 uncharacterized protein LOC101210146 [Cucumis sativus]3.28e-14295.5Show/hide
Query:  LFHSSLCSSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKP
        LFHSSL S MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDP F ALNQ ETFPIEKRRRS+ILRQRKP+TEIAKP
Subjt:  LFHSSLCSSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKP

Query:  EPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET
        EPPNFEIGWKRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET
Subjt:  EPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET

Query:  LSERLGQAKARCRQAILVANSF
        LSERLGQAKARCRQAILVANSF
Subjt:  LSERLGQAKARCRQAILVANSF

XP_008452345.1 PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]1.66e-14299.06Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQ ETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

XP_038903492.1 uncharacterized protein LOC120090072 isoform X1 [Benincasa hispida]2.33e-12492.57Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDP FSALNQ E+FPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  AR
        AR
Subjt:  AR

XP_038903493.1 uncharacterized protein LOC120090072 isoform X2 [Benincasa hispida]4.27e-12691.3Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPIL+LPQS PSFTTPLQITSKR+ SIK NSQ+SESDPNFPSPDP FSALNQ E+FPIEKRRRSEI+RQR+PTT+IAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLM+REFGSTELLAKVGEIVAERAREEAEIL DDGKVEERMVTELFRVLKLMEMD AMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAI
        ARC   I
Subjt:  ARCRQAI

TrEMBL top hitse value%identityAlignment
A0A0A0L6D8 Uncharacterized protein3.2e-10995.5Show/hide
Query:  LFHSSLCSSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKP
        LFHSSL S MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDP F ALNQ ETFPIEKRRRS+ILRQRKP+TEIAKP
Subjt:  LFHSSLCSSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKP

Query:  EPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET
        EPPNFEIGWKRTKEI++EKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET
Subjt:  EPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDET

Query:  LSERLGQAKARCRQAILVANSF
        LSERLGQAKARCRQAILVANSF
Subjt:  LSERLGQAKARCRQAILVANSF

A0A1S3BT06 uncharacterized protein LOC1034934034.1e-10999.06Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDP FSALNQ ETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A5D3C0F1 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 11.1e-10999.53Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQ ETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1EVI2 uncharacterized protein LOC1114384547.8e-9284.51Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+K +S+ SESDPNFPSP+P F ALNQ E+FPIEKRRRSEI+RQR+P+ +I KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAVKDETLSERL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

A0A6J1JD53 uncharacterized protein LOC1114833066.0e-9284.04Show/hide
Query:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW
        MA  HLH L  PNP+LLLPQS P+FT PLQIT KR LS+K +S+ SESDPNFPSPDP F ALNQ E+FP+EKRRRSEI+RQR+P+ EI KPEPPNFEIGW
Subjt:  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGW

Query:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK
        KRTKEINLEKP+GWMIMDFLEKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDLAMVKAAV+DETL++RL QAK
Subjt:  KRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAK

Query:  ARCRQAILVANSF
        ARCRQAILVANSF
Subjt:  ARCRQAILVANSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G51100.1 unknown protein4.1e-6164.19Show/hide
Query:  SSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEI
        +S ++  L  LS+ N  + +P    SF   ++ T+K       N +  +   N  +P P+      +E FPIEKRRRSEI+R R     I KPEPPNFEI
Subjt:  SSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEI

Query:  GWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQ
        GWKRTKEINLEKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ Q
Subjt:  GWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQ

Query:  AKARCRQAILVANSF
        A+ARCRQAILVANSF
Subjt:  AKARCRQAILVANSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAAAGAAGAAGCTTATCTACTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCTGTTCTTCCATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAA
TCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACC
CCAATTTCCCATCCCCAGATCCCAAATTCAGCGCTCTTAACCAATCAGAAACTTTCCCAATAGAGAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACA
GAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTT
AGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCA
AAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGCCTT
GGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAGATATTTTTGAGATATGAGAAAGCATAAAACTATCCAACAATGCTAAAAGAAGAAGCTTATCTACTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCT
GTTCTTCCATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAA
CGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCCAAATTCAGCGCTCTTAACCAATCAGAAACTTTCCCAATAGA
GAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATC
TTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTG
GCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGC
TATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGAGTTATATAAC
AAATTGTTGAGGCAATTCATTTCTCTTTGTAAAGTGTATCAATCCATTTTCGCCCTAATTCAAATTTAGTTTAGATTGTGCTTTGTGCCTAATATTGTGTGTTTGTCTTA
ATAATTTGTAGTGTTATTTTGATAAGGAGTTTTGGTTAGTTGGGAAATATTGAAGTACATTGGCAATACCATATTTCCCTTGTTCGAACTATCTGTTTGCTTTAATACCT
TTCTGTAGATTTCTTGTCGTTGCGAATAATAAGTAGA
Protein sequenceShow/hide protein sequence
MLKEEAYLLCFPFIPLFHSSLCSSMASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPKFSALNQSETFPIEKRRRSEILRQRKPTT
EIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERL
GQAKARCRQAILVANSF