| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_004145446.1 DNA-directed RNA polymerases II and IV subunit 5A [Cucumis sativus] | 1.21e-108 | 83.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFEL TMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNE+KKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| XP_008459046.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 [Cucumis melo] | 6.26e-111 | 85.85 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| XP_016902349.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 [Cucumis melo] | 9.30e-105 | 83.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNEEKKTLLERYTVKDT QVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| XP_018829461.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Juglans regia] | 4.11e-91 | 70.39 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
M LSEEEITRLFR+R+TV+QML+DRG+ VGDFE+ +MK+ED+VINKS RNNSSDQIY+FFPEEPKV VKT++TY RMKS+NVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FARSSI E + KFHLEVFQ HQ+LTNEEKKTLLERYTVK+TQLPR+QVTDP+ARYYG+KRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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| XP_022959553.1 DNA-directed RNA polymerases II and IV subunit 5A-like [Cucurbita moschata] | 4.11e-91 | 70.87 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVL+EEEITRLFRVRKTVLQML+DRG+ VGDFE+ +MK+EDIVINK+ RN+SSDQIY+FFPEEPKV VKT++TY NRMKS+NVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FAR+ I E + KFHLEVFQ HQLL+NEEKKTLLERYTVK+TQLPR+QVTDP+ARYYG+KRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LYM6 Uncharacterized protein | 1.9e-82 | 83.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEIT+LFR RKTVLQMLRDRGF+VGDFEL TMKKED+VINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNE+KKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| A0A1S3C8T2 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 3.4e-84 | 85.85 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
|
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| A0A1S4E290 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X2 | 1.5e-79 | 83.41 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNEEKKTLLERYTVKDT QVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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|
| A0A5A7TIR4 DNA-directed RNA polymerases II and IV subunit 5A-like isoform X1 | 3.4e-84 | 85.85 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VVQEKLSSFARSSICEAPKFHLEVFQ HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Subjt: VVQEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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|
| A0A6J1KT45 DNA-directed RNA polymerases II and IV subunit 5A-like | 4.1e-69 | 70.87 | Show/hide |
Query: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
MVL+EEEITRLFRVRKTVLQML+DRG+ VGDFE+ +MK+EDIVINK+ RN+SSDQIY+FFPEEPKV VKT++TY NRMKS+NVFRAIL
Subjt: MVLSEEEITRLFRVRKTVLQMLRDRGFLVGDFEL-------------TMKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAIL
Query: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VVQ+ L+ FAR+ I E + KFHLEVFQ HQLL+NEEKKTLLERYTVK+TQLPR+QVTDP+ARYYG+KRGQVVKIIRPSETAGRYV
Subjt: VVQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYRYVV
Subjt: TYRYVV
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|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| B0BNE2 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.0e-40 | 42.72 | Show/hide |
Query: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE RL+++RKT++Q+ DRG+LV EL ++ D+ + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F +H ++T EE LL RY ++++QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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|
| O81098 DNA-directed RNA polymerases II and IV subunit 5A | 1.6e-62 | 62.44 | Show/hide |
Query: VLSEEEITRLFRVRKTVLQMLRDRGFLVGDFELT-------------MKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
+L+EEE+ RL+R++KT++QMLRDRG+ + D ELT MK+ED+V K+ RN++SDQ+Y+FFP+E KV VKT++ Y NRMKS+NVFRAILV
Subjt: VLSEEEITRLFRVRKTVLQMLRDRGFLVGDFELT-------------MKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
Query: VQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VQ+ L+ FAR+ I E + KFHLEVFQ HQ+LT EEKKTLLERYTVK+TQLPR+QVTDPIARY+G+KRGQVVKIIRPSETAGRYVT
Subjt: VQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| P19388 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 6.5e-40 | 42.72 | Show/hide |
Query: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE RL+++RKT++Q+ DRG+LV EL ++ D+ + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F +H ++T EE LL RY +++ QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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| Q5R587 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 6.5e-40 | 42.72 | Show/hide |
Query: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE RL+++RKT++Q+ DRG+LV EL ++ D+ + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F +H ++T EE LL RY +++ QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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| Q80UW8 DNA-directed RNA polymerases I, II, and III subunit RPABC1 | 5.0e-40 | 42.72 | Show/hide |
Query: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
EEE RL+++RKT++Q+ DRG+LV EL ++ D+ + + ++ +DQ++VFFPEEPKV +KT++ Y RM+ +N+ RA+
Subjt: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTM------------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAI
Query: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
+VVQ+ ++ A+ S+ + APK+ LE F +H ++T EE LL RY ++++QLPR+Q DP+ARY+G+KRGQVVKIIRPSETAGRY
Subjt: LVVQEKLSSFARSSICE-APKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRY
Query: VTYRYV
+TYR V
Subjt: VTYRYV
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|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G41340.1 RNA polymerase II fifth largest subunit, D | 9.4e-18 | 29.7 | Show/hide |
Query: SEEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKED-------------IVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTY-INRMKSDNVFRAILVV
S E + + R+T ++MLRDRG+ V D ++ + + + I+ R +SS +I V F V V +R + + +N+ ILV+
Subjt: SEEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKED-------------IVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTY-INRMKSDNVFRAILVV
Query: QEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYR
Q +++ A ++ E F +E+F+ HQ+L ++EK++LL+++++++ QLPR+ DPI RYYG++ GQV+K+ E + +VTYR
Subjt: QEKLSSFARSSICEAPKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYR
Query: YV
V
Subjt: YV
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| AT3G22320.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 1.1e-63 | 62.44 | Show/hide |
Query: VLSEEEITRLFRVRKTVLQMLRDRGFLVGDFELT-------------MKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
+L+EEE+ RL+R++KT++QMLRDRG+ + D ELT MK+ED+V K+ RN++SDQ+Y+FFP+E KV VKT++ Y NRMKS+NVFRAILV
Subjt: VLSEEEITRLFRVRKTVLQMLRDRGFLVGDFELT-------------MKKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYINRMKSDNVFRAILV
Query: VQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
VQ+ L+ FAR+ I E + KFHLEVFQ HQ+LT EEKKTLLERYTVK+TQLPR+QVTDPIARY+G+KRGQVVKIIRPSETAGRYVT
Subjt: VQEKLSSFARSSICE-APKFHLEVFQ----------------HQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVT
Query: YRYVV
YRYVV
Subjt: YRYVV
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| AT3G54490.1 RNA polymerase II fifth largest subunit, E | 3.2e-18 | 31.5 | Show/hide |
Query: EITRLFRVRKTVLQMLRDRGFLVGDFELTM-------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRT-YINRMKSDNVFRAILVVQEK
E R + R T +MLRDRG+ V + EL++ + E + I +R++ +I V F ++VK+VR +I + + ILV+Q K
Subjt: EITRLFRVRKTVLQMLRDRGFLVGDFELTM-------------KKEDIVINKSMRNNSSDQIYVFFPEEPKVSVKTVRT-YINRMKSDNVFRAILVVQEK
Query: LSSFARSSICEAPKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYRYVV
++ FA+ ++ P F +E F + ++L EEK+ LL ++ ++D QLP +Q D RYYG+K+ QVVKI E G +VTYR ++
Subjt: LSSFARSSICEAPKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTYRYVV
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| AT3G57080.1 Eukaryotic rpb5 RNA polymerase subunit family protein | 5.0e-19 | 31.03 | Show/hide |
Query: LSEEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKED-------------IVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYI-NRMKSDNVFRAILV
LS EE R + R+ LQMLRDRG+ V D ++ + D + I+ R++S+ ++ + F V V +R+ + + + + + ILV
Subjt: LSEEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKED-------------IVINKSMRNNSSDQIYVFFPEEPKVSVKTVRTYI-NRMKSDNVFRAILV
Query: VQEKLSSFARSSICEAPKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTY
+Q +++ A +I E F +E+F QHQ+L +EEK TLL+++++++ QLPR+ D I RYYG+++GQVVK+ E +V +
Subjt: VQEKLSSFARSSICEAPKFHLEVF----------------QHQLLTNEEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYVTY
Query: RYV
R V
Subjt: RYV
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| AT5G57980.1 RNA polymerase II fifth largest subunit, C | 8.5e-35 | 42.23 | Show/hide |
Query: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKEDIV----------------INKSMRNNSSDQIYVFFPEEPKVSVKTVRTYIN-RMKSDNVFRAIL
++EITR+F+VR+TVLQMLRDRG+ + + +L +K+E+ V ++ + N +D+IYVF+PE PKV V ++ + +M+ D V R I+
Subjt: EEEITRLFRVRKTVLQMLRDRGFLVGDFELTMKKEDIV----------------INKSMRNNSSDQIYVFFPEEPKVSVKTVRTYIN-RMKSDNVFRAIL
Query: VVQEKLSSFARSSICEAPK-FHLEVFQH-QLLTN---------------EEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
VV +++ AR ++ E K +EVF+ +L+TN + KK LL YTV+DTQLPR+ VTDP+ARYYG+KRGQVVKI R T+ Y
Subjt: VVQEKLSSFARSSICEAPK-FHLEVFQH-QLLTN---------------EEKKTLLERYTVKDTQLPRMQVTDPIARYYGMKRGQVVKIIRPSETAGRYV
Query: TYRYVV
TYR+ V
Subjt: TYRYVV
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