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IVF0015443 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015443
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING/U-box superfamily protein
Genome locationchr04:22601869..22602282
RNA-Seq ExpressionIVF0015443
SyntenyIVF0015443
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052771.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]8.02e-1761.54Show/hide
Query:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        E+ DG+EE    GDCC+C+EEL  E     +KEV R+ CGHVYHKSCI+ WV RN SCPLCR KI
Subjt:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

KAA0052772.1 RING finger protein 165-like protein [Cucumis melo var. makuwa]1.28e-98100Show/hide
Query:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV
        MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV
Subjt:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV

Query:  CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD
        CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD
Subjt:  CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD

XP_031738983.1 E3 ubiquitin-protein ligase RNF181 homolog [Cucumis sativus]9.19e-3956.55Show/hide
Query:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPA--------------SEEVDGYEEEELEGDCCICWE
        MS+ IRFT RRH  RHD+SLQNR+  R     PLP +EL PY+++H  RRRV+ +E VI EEDPA              SE+ DG  E E  GDCCIC E
Subjt:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPA--------------SEEVDGYEEEELEGDCCICWE

Query:  ELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        ELN       KK+VCR+KCGHVYH+ CIL WVR  LSCPLCRRKI
Subjt:  ELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

XP_038876865.1 putative RING-H2 finger protein ATL53 [Benincasa hispida]3.12e-1744.79Show/hide
Query:  RRRVLRDERVIPEEDPASEEVDGYEEEELE------------GDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE
        RR ++ +ER + EE PA       E + L+            GDCC+C+EELN+      +KEV R++CGH+YHKSCIL W++   SCPLCRR+IE
Subjt:  RRRVLRDERVIPEEDPASEEVDGYEEEELE------------GDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE

XP_038905732.1 E3 ubiquitin-protein ligase arkadia-A-like [Benincasa hispida]7.67e-2154.64Show/hide
Query:  RRRVLRDERVIPEEDPAS-------------EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE
        RR V+ +E VI EE P               E+ DG+  EEL GDCC+C EEL E     GKKEV R+ CGHVYHKSCIL W + N SCPLCRRKIE
Subjt:  RRRVLRDERVIPEEDPAS-------------EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE

TrEMBL top hitse value%identityAlignment
A0A0A0LER3 Uncharacterized protein1.9e-1352.21Show/hide
Query:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPA--------------SEEVDGYEEEELEGDCCICWE
        MS+ IRFT RRH  RHD+SLQNR+  R     PLP +E LPY+++H  RRRV+ +E VI EEDPA              SE+ DG  E E  GDCCIC E
Subjt:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPA--------------SEEVDGYEEEELEGDCCICWE

Query:  ELNEEPNEKGKKE
        ELN    EK KKE
Subjt:  ELNEEPNEKGKKE

A0A5A7T784 E3 ubiquitin-protein ligase synoviolin B-like7.9e-1255.74Show/hide
Query:  DGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRK
        DG   EE+   CC+C+E+LN E  E+ ++EV R+ CGHVYHK CIL W+  N SCPLCRR+
Subjt:  DGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRK

A0A5A7UAN0 RING finger protein 165-like protein7.8e-76100Show/hide
Query:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV
        MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV
Subjt:  MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEV

Query:  CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD
        CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD
Subjt:  CRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCNVD

A0A5D3BYE9 RING finger protein 165-like protein3.2e-1361.54Show/hide
Query:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        E+ DG+EE    GDCC+C+EEL  E     +KEV R+ CGHVYHKSCI+ WV RN SCPLCR KI
Subjt:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

A0A6J1G7Z5 E3 ubiquitin-protein ligase RNF126-like4.6e-1256.06Show/hide
Query:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE
        +E DG  EEE EGDC +C E L      KG++EV R+ CGHVYHK CIL W++ + SCPLCR K+E
Subjt:  EEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIE

SwissProt top hitse value%identityAlignment
Q08109 ERAD-associated E3 ubiquitin-protein ligase HRD14.8e-0640.38Show/hide
Query:  CCICWEELNEEPNEK----GKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCR
        C IC +EL   PN++      K+  R+ CGH+ H SC+  W+ R+ +CP+CR
Subjt:  CCICWEELNEEPNEK----GKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCR

Q8GXF8 E3 ubiquitin-protein ligase SGR9, amyloplastic5.3e-0539.22Show/hide
Query:  EGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCR
        E +C IC EE++E       ++VC + C H +H  CIL W+ +  +CP CR
Subjt:  EGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCR

Q9R049 E3 ubiquitin-protein ligase AMFR5.3e-0525.26Show/hide
Query:  VIHPFRRRVLRDE---RVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCN
        + H  +RR+ R +   RV+   +         E      DC ICW+ +         +   ++ CGH++H SC+ +W+ ++ SCP CR  + + +
Subjt:  VIHPFRRRVLRDE---RVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCN

Q9SRM0 RING-H2 finger protein ATL665.3e-0540Show/hide
Query:  EEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIEL
        EEE E +CCIC         E+G+K      C H YH  C+  W++   SCPLCR  I +
Subjt:  EEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIEL

Q9UKV5 E3 ubiquitin-protein ligase AMFR5.3e-0525.26Show/hide
Query:  VIHPFRRRVLRDE---RVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCN
        + H  +RR+ R +   RV+   +         E      DC ICW+ +         +   ++ CGH++H SC+ +W+ ++ SCP CR  + + +
Subjt:  VIHPFRRRVLRDE---RVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIELCN

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein3.4e-0736.84Show/hide
Query:  VIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIEL
        +I +ED   E+V           C IC EE   E  E+GK+    +KC H+YH SCI++W+  + +CP+CR ++ L
Subjt:  VIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKIEL

AT4G05350.1 RING/U-box superfamily protein1.2e-0743.14Show/hide
Query:  CCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        C IC E L   P     ++V R+ C HV+H  C+L W++R  +CPLCR +I
Subjt:  CCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

AT4G12190.1 RING/U-box superfamily protein2.6e-0739.22Show/hide
Query:  CCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        C IC E L   P     +++ R+ C HV+H  C+L W++R  +CPLCR ++
Subjt:  CCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

AT5G05910.1 RING/U-box superfamily protein2.4e-0839.29Show/hide
Query:  ELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI
        ++E  C IC E+L +  N+  K  VC  KC H +H +CI +W+R +  CP+CR  +
Subjt:  ELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRRKI

AT5G41440.1 RING/U-box superfamily protein6.9e-0834.26Show/hide
Query:  PFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRR
        P PP PP + +    I    +  +  E +I  ED          EE  EG C IC EE      + G + +C  KC HV+H+ C+L+W+  N +CP+CR 
Subjt:  PFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYHKSCILAWVRRNLSCPLCRR

Query:  KIELCNVD
            C+VD
Subjt:  KIELCNVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTAACCCCATACGCTTCACTCGCCGCCGCCACATCGCCAGGCACGATCGATCGCTCCAAAACCGATCGAGGCTTCGGGGCCATCCCTTCCCCCCACTACCACCCAA
CGAACTTCTTCCGTACGATGTCATCCATCCATTTAGGCGCCGCGTTCTGAGGGACGAGAGAGTGATTCCAGAAGAAGATCCAGCGAGCGAGGAAGTTGATGGGTATGAGG
AAGAAGAGTTGGAGGGAGATTGTTGTATTTGTTGGGAAGAACTGAATGAAGAACCGAATGAAAAAGGGAAGAAGGAGGTGTGTAGAGTCAAGTGCGGCCATGTGTATCAT
AAGTCTTGTATACTCGCTTGGGTTCGAAGAAATCTTTCTTGTCCTTTGTGTAGAAGAAAAATAGAATTATGCAATGTAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTAACCCCATACGCTTCACTCGCCGCCGCCACATCGCCAGGCACGATCGATCGCTCCAAAACCGATCGAGGCTTCGGGGCCATCCCTTCCCCCCACTACCACCCAA
CGAACTTCTTCCGTACGATGTCATCCATCCATTTAGGCGCCGCGTTCTGAGGGACGAGAGAGTGATTCCAGAAGAAGATCCAGCGAGCGAGGAAGTTGATGGGTATGAGG
AAGAAGAGTTGGAGGGAGATTGTTGTATTTGTTGGGAAGAACTGAATGAAGAACCGAATGAAAAAGGGAAGAAGGAGGTGTGTAGAGTCAAGTGCGGCCATGTGTATCAT
AAGTCTTGTATACTCGCTTGGGTTCGAAGAAATCTTTCTTGTCCTTTGTGTAGAAGAAAAATAGAATTATGCAATGTAGATTAG
Protein sequenceShow/hide protein sequence
MSNPIRFTRRRHIARHDRSLQNRSRLRGHPFPPLPPNELLPYDVIHPFRRRVLRDERVIPEEDPASEEVDGYEEEELEGDCCICWEELNEEPNEKGKKEVCRVKCGHVYH
KSCILAWVRRNLSCPLCRRKIELCNVD