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IVF0015445 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015445
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-box protein
Genome locationchr02:2470797..2472024
RNA-Seq ExpressionIVF0015445
SyntenyIVF0015445
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR024766 - Zinc finger, RING-H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144035.1 RING-box protein 1a [Cucumis sativus]4.02e-6585.47Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_014491865.1 RING-box protein 1a [Vigna radiata var. radiata]6.46e-6483.62Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK---------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
        MATLD+DVPM+PAGEASSSAGPSS K         N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK---------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ

Query:  VCPLDNSEWEFQKYGH
        VCPLDNSEWEFQKYGH
Subjt:  VCPLDNSEWEFQKYGH

XP_022933228.1 RING-box protein 1a [Cucurbita moschata]1.64e-6484.62Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_023880628.1 RING-box protein 1a [Quercus suber]6.67e-6483.76Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVP GEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

XP_024017218.1 RING-box protein 1a [Morus notabilis]6.46e-6484.48Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK---------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
        MATLDTDVPMVPAGE SSSAGPSS K         N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK---------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ

Query:  VCPLDNSEWEFQKYGH
        VCPLDNSEWEFQKYGH
Subjt:  VCPLDNSEWEFQKYGH

TrEMBL top hitse value%identityAlignment
A0A0A0LWN9 RING-type domain-containing protein1.7e-4985.47Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A1S3BQE3 RING-box protein 1a1.7e-4985.47Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A5D3CFD3 RING-box protein 1a1.7e-4985.47Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLDTDVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1F460 RING-box protein 1a4.8e-4984.62Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

A0A6J1I027 RING-box protein 1a4.8e-4984.62Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
        MATLD+DVPMVPAGEASSSAGPSSSK          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSK----------NLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR

Query:  QVCPLDNSEWEFQKYGH
        QVCPLDNSEWEFQKYGH
Subjt:  QVCPLDNSEWEFQKYGH

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX12.3e-4073.58Show/hide
Query:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
        A +D D P      A          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWE
Subjt:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE

Query:  FQKYGH
        FQKYGH
Subjt:  FQKYGH

P62878 E3 ubiquitin-protein ligase RBX12.3e-4073.58Show/hide
Query:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
        A +D D P      A          N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWE
Subjt:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE

Query:  FQKYGH
        FQKYGH
Subjt:  FQKYGH

Q8QG64 RING-box protein 13.6e-4174.53Show/hide
Query:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE
        A +D D P      AS         N   L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN EWE
Subjt:  ATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWE

Query:  FQKYGH
        FQKYGH
Subjt:  FQKYGH

Q940X7 RING-box protein 1a2.0e-4777.97Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLD+DV M+PAGEASSS   SSS   +            L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Q9M2B0 RING-box protein 1b1.8e-4072.03Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L++DV M   GE+SS + PSSS   S            L + +IVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

Arabidopsis top hitse value%identityAlignment
AT3G05870.1 anaphase-promoting complex/cyclosome 114.4e-1037.68Show/hide
Query:  DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK
        + C ICR      C +C+        ++C + WG CNHAFH HCI +W+  +T Q  CP+   EW+F++
Subjt:  DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQV-CPLDNSEWEFQK

AT3G42830.1 RING/U-box superfamily protein1.3e-4172.03Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MA+L++DV M   GE+SS + PSSS   S            L + +IVVDNCAICRNHIMDLCIEC ANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLD  EWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.1 RING-box 11.4e-4877.97Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
        MATLD+DV M+PAGEASSS   SSS   +            L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKT

Query:  RQVCPLDNSEWEFQKYGH
        RQVCPLDNSEWEFQKYGH
Subjt:  RQVCPLDNSEWEFQKYGH

AT5G20570.2 RING-box 11.6e-4464.79Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------
        MATLD+DV M+PAGEASSS   SSS   +            L + +IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW                  
Subjt:  MATLDTDVPMVPAGEASSSAGPSSSKNLSD-----------LRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW------------------

Query:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
              GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  ------GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH

AT5G20570.3 RING-box 11.0e-4669.85Show/hide
Query:  MATLDTDVPMVPAGEASSSAGPSSS-----------------------KNLSDLRS------RNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        MATLD+DV M+PAGEASSS   SSS                       +N   L S      R IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MATLDTDVPMVPAGEASSSAGPSSS-----------------------KNLSDLRS------RNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Query:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
        GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
Subjt:  GVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTGGATACCGATGTCCCTATGGTTCCCGCCGGTGAAGCTTCAAGCAGTGCTGGCCCTTCGTCTTCCAAAAACCTAAGCGATTTGAGATCAAGAAATATTGT
TGTCGATAACTGTGCAATTTGTAGGAATCACATAATGGATCTTTGTATTGAATGTCAGGCGAATCAAGCGAGTGCTACCAGTGAGGAATGCACTGTTGCCTGGGGGGTAT
GCAACCATGCTTTCCACTTCCACTGCATTAGTCGTTGGTTGAAGACTCGCCAAGTTTGTCCATTAGACAACAGCGAATGGGAGTTCCAGAAGTATGGACATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACCTTGGATACCGATGTCCCTATGGTTCCCGCCGGTGAAGCTTCAAGCAGTGCTGGCCCTTCGTCTTCCAAAAACCTAAGCGATTTGAGATCAAGAAATATTGT
TGTCGATAACTGTGCAATTTGTAGGAATCACATAATGGATCTTTGTATTGAATGTCAGGCGAATCAAGCGAGTGCTACCAGTGAGGAATGCACTGTTGCCTGGGGGGTAT
GCAACCATGCTTTCCACTTCCACTGCATTAGTCGTTGGTTGAAGACTCGCCAAGTTTGTCCATTAGACAACAGCGAATGGGAGTTCCAGAAGTATGGACATTAG
Protein sequenceShow/hide protein sequence
MATLDTDVPMVPAGEASSSAGPSSSKNLSDLRSRNIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH