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IVF0015446 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015446
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:9911189..9911416
RNA-Seq ExpressionIVF0015446
SyntenyIVF0015446
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043083.1 uncharacterized protein E6C27_scaffold158G00210 [Cucumis melo var. makuwa]5.22e-2680Show/hide
Query:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
        ++VIQTQIHQEVEEDNIIRG           MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKK VIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
KAA0058597.1 retrotransposon protein [Cucumis melo var. makuwa]5.21e-1674.14Show/hide
Query:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
        I  +VE+D I+ G MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKK VIPHCF
Subjt:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
XP_031737535.1 uncharacterized protein LOC105435097 [Cucumis sativus]2.18e-0894.44Show/hide
Query:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK
        TKDRLNVIIVIN AII GNAEIELKKMQIMLRKMKK
Subjt:  TKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKK
TrEMBL top hitse value%identityAlignment
A0A5A7TIB1 Uncharacterized protein5.8e-2180Show/hide
Query:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
        ++VIQTQIHQEVEEDNIIRG           MTKDRLNVIIVINSAI+LGNAEIELKKMQIMLRKMKK VIPHCF
Subjt:  MRVIQTQIHQEVEEDNIIRGD----------MTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
A0A5A7UV40 Retrotransposon protein3.8e-1274.14Show/hide
Query:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
        I  +VE+D I+ G MTKD LNVIIVIN AIILGNAEIE KKMQ ML+ MKK VIPHCF
Subjt:  IHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGAGGTGATTCCTCATTGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTAATTCAAACTCAAATTCATCAAGAGGTAGAGGAAGACAACATTATTCGAGGAGATATGACAAAAGACAGGTTGAATGTTATAATTGTCATAAATTCGGCCAT
TATTCTTGGGAATGCAGAAATAGAGTTGAAGAAAATGCAAATTATGCTGAGAAAGATGAAGAAAGAGGTGATTCCTCATTGTTTCTAG
Protein sequenceShow/hide protein sequence
MRVIQTQIHQEVEEDNIIRGDMTKDRLNVIIVINSAIILGNAEIELKKMQIMLRKMKKEVIPHCF