; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0015447 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015447
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionEnzymatic polyprotein
Genome locationchr04:17154598..17156415
RNA-Seq ExpressionIVF0015447
SyntenyIVF0015447
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056776.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.14e-17155.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

KAA0058433.1 Enzymatic polyprotein [Cucumis melo var. makuwa]3.42e-22879.58Show/hide
Query:  RQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKES
        +QSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKES
Subjt:  RQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKES

Query:  GET---------------------------------------------------------------------------------------VTPKYISNIE
        GET                                                                                       VTPKYISNIE
Subjt:  GET---------------------------------------------------------------------------------------VTPKYISNIE

Query:  EEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCI
        EEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCI
Subjt:  EEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCI

Query:  AEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVP
        AEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVP
Subjt:  AEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVP

Query:  FGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
        FGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
Subjt:  FGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY

KAA0059217.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.21e-17255.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

TYJ97599.1 Enzymatic polyprotein [Cucumis melo var. makuwa]7.14e-17155.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

TYK21091.1 Enzymatic polyprotein [Cucumis melo var. makuwa]1.70e-17355.15Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE +KRT LLKL+QS+EEQ   K IQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K+LK+E A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ+ Q  KE    S+++  R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMV LPY DGF+EAQIPTKARPIQMN+DL++ C  EI DLL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIH +D YKT F VPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

TrEMBL top hitse value%identityAlignment
A0A5A7UR29 Enzymatic polyprotein5.7e-14955.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

A0A5A7URD4 Enzymatic polyprotein2.2e-18575.05Show/hide
Query:  INVITKD---QETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAF
        IN++  +    E  F       D+D         +QSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAF
Subjt:  INVITKD---QETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAF

Query:  QAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESGET---------------------------------------------------------------
        QAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESGET                                                               
Subjt:  QAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESGET---------------------------------------------------------------

Query:  ------------------------VTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKR
                                VTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKR
Subjt:  ------------------------VTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKR

Query:  HMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKR
        HMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKR
Subjt:  HMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKR

Query:  ITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
        ITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
Subjt:  ITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY

A0A5A7UX67 Enzymatic polyprotein5.7e-14955.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

A0A5D3BEY3 Enzymatic polyprotein5.7e-14955.92Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE++KRT LLKL+QS+EEQ   KAIQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K LKRE A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ  Q  KE    S+++ +R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA+KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMVTLPY DGF+EAQIPTKARPIQMN+DL++ C  EI +LL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIHP+D YKT FNVPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

A0A5D3DBS1 Reverse transcriptase2.2e-14555.15Show/hide
Query:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH
        CA KCSGHINVITKDQET+FDLIEQ+PDE +KRT LLKL+QS+EEQ   K IQ+PI+YS+QDILNR+KGE K PIQVEDLH E+K+LK+E A+NKQRL +
Subjt:  CASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDILNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTH

Query:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------
        LE AFQAFQ+ Q  KE    S+++  R S GKALLI+E G                                                            
Subjt:  LEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESG------------------------------------------------------------

Query:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ
                                                                                  VTPKYISNIEEE+ QFIN IA KEK 
Subjt:  ------------------------------------------------------------------------ETVTPKYISNIEEEIHQFINHIAIKEKQ

Query:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK
        IEFLQD++   +V  +I +P  Q +I++FQ +LEKEV S +PNAFWD+K+HMV LPY DGF+EAQIPTKARPIQMN+DL++ C  EI DLL K LI+PSK
Subjt:  IEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSK

Query:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA
        SPWSC+AFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRIT AKVFSKFDMK GFW++QIH +D YKT F VPFGQ+QWNVMPFGLKNA
Subjt:  SPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNA

Query:  PSEFQKIMNDIFNQY
        PSEFQKIMNDIFNQY
Subjt:  PSEFQKIMNDIFNQY

SwissProt top hitse value%identityAlignment
P03554 Enzymatic polyprotein6.1e-3134.14Show/hide
Query:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-
        +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++  +  LEK  S N  +    ++    ++   D  +  ++ 
Subjt:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-

Query:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF
        P K  P  M+R+     I E+ DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD K GF
Subjt:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF

Query:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
        W+V +       T F  P G Y+WNV+PFGLK APS FQ+ M++ F  +
Subjt:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY

P03555 Enzymatic polyprotein7.9e-3134.14Show/hide
Query:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-
        +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++  +  LEK  S N  +    ++    ++   D  +  ++ 
Subjt:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-

Query:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF
        P K  P  M+R+     I E+ DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD K GF
Subjt:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF

Query:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
        W+V +       T F  P G Y+WNV+PFGLK APS FQ+ M++ F  +
Subjt:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY

Q02964 Enzymatic polyprotein7.9e-3134.14Show/hide
Query:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-
        +K+  +T  P+ ++    +I   +  IAI  +     ++++ I           TQ+R++  +  LEK  S N  +    ++    ++   D  +  ++ 
Subjt:  IKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQDEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQI-

Query:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF
        P K  P  M+R+     I E+ DL    +I PSKSP    AF VNN+AEK RG  R+V+NYK +NK      Y +PN+ +LL  I   K+FS FD K GF
Subjt:  PTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGF

Query:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY
        W+V +       T F  P G Y+WNV+PFGLK APS FQ+ M++ F  +
Subjt:  WEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY

Q6XKE6 Genome polyprotein3.9e-3845.98Show/hide
Query:  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIR
        S   +  W  +   + LP+     E   PTKA    MN + ++  + E ++L +  LI PS S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  +
Subjt:  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIR

Query:  YPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF
        +PIPN+  L   ++ AK+FSKFD+K GFW++ IHPN+  KT F +P   +QW VMPFGLK APS FQK M  IF
Subjt:  YPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF

Q91DM0 Genome polyprotein1.8e-3846.55Show/hide
Query:  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIR
        S   +  W  +   + LP+     E   PTKA    MN + ++  I E ++L +  LI PS S W+C AFYVN ++E+ RG  RLVINY+PLN  L+  +
Subjt:  SNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAEKERGVPRLVINYKPLNKVLKWIR

Query:  YPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF
        +PIPN+  L   ++ AK+FSKFD+K GFW++ IHPN+  KT F +P   +QW VMPFGLK APS FQK M  IF
Subjt:  YPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIF

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACCTCTTCAGAAACCGATTCTTCTACTGAAGAAAAAGGTATCAACATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGC
GATGACGACGGAGCAATTCCCTGCACAGGAATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTC
CCGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTCAAAGTCCAATCATCTACTCGTTTCAAGATATT
CTAAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACA
TCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTCAAATTCCAAAAGAAGCCCCAGGAACTTCCTCAACCAATCCCGACAGATATTCGAAGGGAAAGGCACTGCTGATTA
AAGAGTCCGGTGAAACCGTAACTCCTAAGTATATTTCCAACATTGAAGAAGAAATTCATCAATTCATCAACCACATCGCCATAAAGGAAAAGCAAATTGAATTCCTCCAA
GATGAAGTCATAATCGAAAGAGTGGTCGCTCAGATCAATCAGCCTGCCACTCAACGACGCATTAAAGATTTCCAATCCAAGTTGGAAAAGGAAGTCAGTTCAAATATCCC
AAATGCCTTTTGGGATCAGAAGAGACACATGGTAACCCTACCATATGTTGATGGATTTGAAGAGGCCCAGATTCCTACAAAGGCTAGGCCCATTCAAATGAATAGAGATC
TCATCAGAACCTGCATTGCGGAAATCAATGATCTCCTAAAAAAAAGCCTTATCAACCCATCAAAAAGCCCATGGTCTTGTGCGGCTTTTTACGTCAACAATCAGGCCGAA
AAGGAACGTGGTGTCCCAAGGCTTGTCATCAATTACAAGCCCCTTAACAAGGTTCTCAAATGGATTAGGTATCCAATTCCTAATCGTCAAGACTTGCTAAAAAGAATCAC
TACGGCAAAAGTTTTCTCAAAGTTTGACATGAAGCCAGGATTTTGGGAAGTTCAAATTCATCCTAATGACTGTTACAAAACGACCTTCAATGTTCCATTTGGACAATATC
AATGGAATGTCATGCCATTTGGATTGAAGAATGCTCCATCCGAATTCCAGAAGATAATGAATGATATCTTCAACCAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACACCTCTTCAGAAACCGATTCTTCTACTGAAGAAAAAGGTATCAACATTCTCAACAATGAAGGATCCTCCAATGAAGATGCCTTCTACTCTCAAAGCGACTCAAGC
GATGACGACGGAGCAATTCCCTGCACAGGAATGTGCCAGTAAATGCTCTGGTCATATTAATGTCATCACGAAAGATCAAGAAACTATTTTTGATCTTATTGAACAACTTC
CCGATGAAGATTCAAAACGAACCTACCTTCTCAAACTCAGACAAAGTGTAGAAGAGCAAAATTCTCCAAAGGCAATTCAAAGTCCAATCATCTACTCGTTTCAAGATATT
CTAAATCGAATCAAAGGAGAAACAAAGAAGCCTATTCAAGTCGAAGATCTTCATCTTGAAATAAAGGTTCTCAAAAGGGAATTTGCAGACAACAAGCAACGACTCACACA
TCTTGAACAAGCCTTCCAGGCATTCCAAGAAATTCAAATTCCAAAAGAAGCCCCAGGAACTTCCTCAACCAATCCCGACAGATATTCGAAGGGAAAGGCACTGCTGATTA
AAGAGTCCGGTGAAACCGTAACTCCTAAGTATATTTCCAACATTGAAGAAGAAATTCATCAATTCATCAACCACATCGCCATAAAGGAAAAGCAAATTGAATTCCTCCAA
GATGAAGTCATAATCGAAAGAGTGGTCGCTCAGATCAATCAGCCTGCCACTCAACGACGCATTAAAGATTTCCAATCCAAGTTGGAAAAGGAAGTCAGTTCAAATATCCC
AAATGCCTTTTGGGATCAGAAGAGACACATGGTAACCCTACCATATGTTGATGGATTTGAAGAGGCCCAGATTCCTACAAAGGCTAGGCCCATTCAAATGAATAGAGATC
TCATCAGAACCTGCATTGCGGAAATCAATGATCTCCTAAAAAAAAGCCTTATCAACCCATCAAAAAGCCCATGGTCTTGTGCGGCTTTTTACGTCAACAATCAGGCCGAA
AAGGAACGTGGTGTCCCAAGGCTTGTCATCAATTACAAGCCCCTTAACAAGGTTCTCAAATGGATTAGGTATCCAATTCCTAATCGTCAAGACTTGCTAAAAAGAATCAC
TACGGCAAAAGTTTTCTCAAAGTTTGACATGAAGCCAGGATTTTGGGAAGTTCAAATTCATCCTAATGACTGTTACAAAACGACCTTCAATGTTCCATTTGGACAATATC
AATGGAATGTCATGCCATTTGGATTGAAGAATGCTCCATCCGAATTCCAGAAGATAATGAATGATATCTTCAACCAATATTAAGAATTCACAATAGTCTATATTGATGAT
GTCTTGGTGTTTTCCGACACAGTAGATCAACATTTCAAACATCTACGAGTGTTTCTCAATGTAGCCAAAACCACGGTCTTGTGGTATCCCAAC
Protein sequenceShow/hide protein sequence
MTPLQKPILLLKKKVSTFSTMKDPPMKMPSTLKATQAMTTEQFPAQECASKCSGHINVITKDQETIFDLIEQLPDEDSKRTYLLKLRQSVEEQNSPKAIQSPIIYSFQDI
LNRIKGETKKPIQVEDLHLEIKVLKREFADNKQRLTHLEQAFQAFQEIQIPKEAPGTSSTNPDRYSKGKALLIKESGETVTPKYISNIEEEIHQFINHIAIKEKQIEFLQ
DEVIIERVVAQINQPATQRRIKDFQSKLEKEVSSNIPNAFWDQKRHMVTLPYVDGFEEAQIPTKARPIQMNRDLIRTCIAEINDLLKKSLINPSKSPWSCAAFYVNNQAE
KERGVPRLVINYKPLNKVLKWIRYPIPNRQDLLKRITTAKVFSKFDMKPGFWEVQIHPNDCYKTTFNVPFGQYQWNVMPFGLKNAPSEFQKIMNDIFNQY