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IVF0015454 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015454
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:26924340..26924816
RNA-Seq ExpressionIVF0015454
SyntenyIVF0015454
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032830.1 uncharacterized protein E6C27_scaffold708G00950 [Cucumis melo var. makuwa]3.25e-3352.5Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K LA ++  DT L NLE+  EDVQ  VGRLSD++E LV+EN EI++ AKEMI+++G++F ++L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE+++LH
Subjt:  LSKDVANLKKFVEGEIYELH

KAA0040414.1 uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa]2.65e-3051.67Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K  A ++  DT L NLE+  EDVQ  VGRLS+++E LV+EN EI++ AKEMI+++GR+F  +L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE++ LH
Subjt:  LSKDVANLKKFVEGEIYELH

KAA0067893.1 uncharacterized protein E6C27_scaffold138G00500 [Cucumis melo var. makuwa]7.04e-10498.73Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        MASQEGYESPVEQ VEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKE+IKEIGRSFCRDLNA
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
        LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
Subjt:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA

TYK04320.1 uncharacterized protein E5676_scaffold527G00540 [Cucumis melo var. makuwa]1.73e-10499.37Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        MASQEGYESPVEQ VEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
        LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
Subjt:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA

TYK30387.1 uncharacterized protein E5676_scaffold575G00690 [Cucumis melo var. makuwa]1.00e-3352.5Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K LA ++  DT L NLE+  EDVQ  VGRLSD++E LV+EN EI++ AKEMI+++G++F ++L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE+++LH
Subjt:  LSKDVANLKKFVEGEIYELH

TrEMBL top hitse value%identityAlignment
A0A5A7SPK5 Uncharacterized protein1.0e-2652.5Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K LA ++  DT L NLE+  EDVQ  VGRLSD++E LV+EN EI++ AKEMI+++G++F ++L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE+++LH
Subjt:  LSKDVANLKKFVEGEIYELH

A0A5A7THC0 Reverse transcriptase domain-containing protein1.5e-2551.67Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K  A ++  DT L NLE+  EDVQ  VGRLS+ +E LV+EN EI++ AKEMI+++GR+F ++L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE+++LH
Subjt:  LSKDVANLKKFVEGEIYELH

A0A5A7VIG6 Uncharacterized protein1.5e-7898.73Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        MASQEGYESPVEQ VEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKE+IKEIGRSFCRDLNA
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
        LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
Subjt:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA

A0A5D3BYX0 Uncharacterized protein5.1e-7999.37Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        MASQEGYESPVEQ VEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
        LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA
Subjt:  LSKDVANLKKFVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA

A0A5D3E2T1 Uncharacterized protein1.0e-2652.5Show/hide
Query:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA
        M+++EG+ SPVEQ +EGP  RG   Q SP++R K+K LA ++  DT L NLE+  EDVQ  VGRLSD++E LV+EN EI++ AKEMI+++G++F ++L  
Subjt:  MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNA

Query:  LSKDVANLKKFVEGEIYELH
        L+  V  LK FVEGE+++LH
Subjt:  LSKDVANLKKFVEGEIYELH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCAAGAAGGATACGAGTCACCCGTTGAGCAAGCTGTTGAAGGGCCAACGATACGAGGACTTACTACACAACGATCTCCTTCCAAGCGACCCAAGACTAAGGC
CTTGGCTACTAAAGATACAACCGACACTCACCTAGCCAACTTGGAGGAACTTTTTGAGGATGTGCAAAGTACGGTTGGTAGGTTGAGTGATGATTATGAGGGGCTAGTCC
GAGAGAATGTCGAGATCAGTGCTGCTGCTAAAGAAATGATTAAGGAGATTGGACGATCATTTTGTAGAGACCTAAATGCTCTATCAAAAGATGTGGCCAACCTAAAGAAA
TTCGTAGAAGGGGAGATCTACGAATTACATAAGGAAGTTGAACGCATCTATTTTGAGTATAATACTCTCCGTGCCACTACAAATGGTCAAGTGTTGACCATGGCGCATTC
ATTGCGTAGGAACAAGGGCAAGTTACTCACGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCAAGAAGGATACGAGTCACCCGTTGAGCAAGCTGTTGAAGGGCCAACGATACGAGGACTTACTACACAACGATCTCCTTCCAAGCGACCCAAGACTAAGGC
CTTGGCTACTAAAGATACAACCGACACTCACCTAGCCAACTTGGAGGAACTTTTTGAGGATGTGCAAAGTACGGTTGGTAGGTTGAGTGATGATTATGAGGGGCTAGTCC
GAGAGAATGTCGAGATCAGTGCTGCTGCTAAAGAAATGATTAAGGAGATTGGACGATCATTTTGTAGAGACCTAAATGCTCTATCAAAAGATGTGGCCAACCTAAAGAAA
TTCGTAGAAGGGGAGATCTACGAATTACATAAGGAAGTTGAACGCATCTATTTTGAGTATAATACTCTCCGTGCCACTACAAATGGTCAAGTGTTGACCATGGCGCATTC
ATTGCGTAGGAACAAGGGCAAGTTACTCACGGCTTAA
Protein sequenceShow/hide protein sequence
MASQEGYESPVEQAVEGPTIRGLTTQRSPSKRPKTKALATKDTTDTHLANLEELFEDVQSTVGRLSDDYEGLVRENVEISAAAKEMIKEIGRSFCRDLNALSKDVANLKK
FVEGEIYELHKEVERIYFEYNTLRATTNGQVLTMAHSLRRNKGKLLTA