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IVF0015498 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015498
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationtig00000084_ERROPOS800000:271188..271817
RNA-Seq ExpressionIVF0015498
SyntenyIVF0015498
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036695.1 retrotransposon protein [Cucumis melo var. makuwa]4.18e-4366.4Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQI-------MVRFG-------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSN A RHVWTKE++ TLVECLMELVSMG    D           +VR         QSHPAAKGLLNK FPYYD+LTYVFGRDR T RF ETFADVG
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQI-------MVRFG-------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEPG-EYDGFAIGDGNEEFPPVYS
         NEPG  YD F +GDGNE+FPPVYS
Subjt:  FNEPG-EYDGFAIGDGNEEFPPVYS

KAA0055383.1 retrotransposon protein [Cucumis melo var. makuwa]4.60e-4866.17Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFGQ--------------------------SHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRF
        MSTSN  LRHVWTKEED+TLVECLMELVSMGDGNQIMVR  Q                          SHP AKGLLNK F YYD+LTYVFGRDR T+RF
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFGQ--------------------------SHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRF

Query:  AETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS
         ETFADVG NEP G YD F +GDGNE+FPPVYS
Subjt:  AETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS

KAA0060132.1 retrotransposon protein [Cucumis melo var. makuwa]5.06e-4465.57Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGN------------QIMVRFG------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSNC  RHVWTKE++ TLVECLMELVSMG               Q++          QSHPAAKGLLN+ FPYYD+LTYVFGRDR TDRFAETFADV 
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGN------------QIMVRFG------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEPGEYDGFAIGDGNEEFPPV
         NEPG YD F +GDGNEEFPPV
Subjt:  FNEPGEYDGFAIGDGNEEFPPV

KAA0062548.1 retrotransposon protein [Cucumis melo var. makuwa]5.76e-4365.6Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQIMVRF--------------GQSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSN A RHVWTK+E+ TLVECLMELVSMG    D      R+               QSHPAAKGLLNK FPYYD+LTYVFGRDR T RFAETFADVG
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQIMVRF--------------GQSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEPGE-YDGFAIGDGNEEFPPVYS
         NEPG  YD F +GDGNE+FPP+YS
Subjt:  FNEPGE-YDGFAIGDGNEEFPPVYS

TYK05474.1 retrotransposon protein [Cucumis melo var. makuwa]4.28e-4460.29Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMV-----------------------------RFGQSHPAAKGLLNKSFPYYDKLTYVFGRDRVT
        MSTSN A RHVWTKEE+ TLVECLMEL   GDGNQIM                               + +SHP AKGLLNK FPYYD+LTYVFGRDR T
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMV-----------------------------RFGQSHPAAKGLLNKSFPYYDKLTYVFGRDRVT

Query:  DRFAETFADVGFNEPGE-YDGFAIGDGNEEFPPVYS
         RFAETFA+VG NEPG  YD F +GDGN+EFPPVYS
Subjt:  DRFAETFADVGFNEPGE-YDGFAIGDGNEEFPPVYS

TrEMBL top hitse value%identityAlignment
A0A5A7TRH0 Retrotransposon protein5.7e-3465.6Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFG------------------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSN A RHVWTKEE+ TLVECLMELVSMG        F                   QSHPAAKGLLNKSFPYYD+LTYVFGRDR TDRFAETFADVG
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFG------------------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEP-GEYDGFAIGDGNEEFPPVYS
         NEP G Y+ F +GDGNE+F PVY+
Subjt:  FNEP-GEYDGFAIGDGNEEFPPVYS

A0A5A7UHG9 Retrotransposon protein3.8e-3866.17Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFGQ--------------------------SHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRF
        MSTSN  LRHVWTKEED+TLVECLMELVSMGDGNQIMVR  Q                          SHP AKGLLNK F YYD+LTYVFGRDR T+RF
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFGQ--------------------------SHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRF

Query:  AETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS
         ETFADVG NEP G YD F +GDGNE+FPPVYS
Subjt:  AETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS

A0A5A7UWC3 Retrotransposon protein1.1e-3465.57Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGN------------QIMVRFG------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSNC  RHVWTKE++ TLVECLMELVSMG               Q++          QSHPAAKGLLN+ FPYYD+LTYVFGRDR TDRFAETFADV 
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGN------------QIMVRFG------QSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEPGEYDGFAIGDGNEEFPPV
         NEPG YD F +GDGNEEFPPV
Subjt:  FNEPGEYDGFAIGDGNEEFPPV

A0A5A7V4P8 Retrotransposon protein3.3e-3465.6Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQIMVRF--------------GQSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG
        MSTSN A RHVWTK+E+ TLVECLMELVSMG    D      R+               QSHPAAKGLLNK FPYYD+LTYVFGRDR T RFAETFADVG
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMG----DGNQIMVRF--------------GQSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVG

Query:  FNEPGE-YDGFAIGDGNEEFPPVYS
         NEPG  YD F +GDGNE+FPP+YS
Subjt:  FNEPGE-YDGFAIGDGNEEFPPVYS

A0A5D3C2F8 Retrotransposon protein1.1e-3460.29Show/hide
Query:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMV-----------------------------RFGQSHPAAKGLLNKSFPYYDKLTYVFGRDRVT
        MSTSN A RHVWTKEE+ TLVECLMEL   GDGNQIM                               + +SHP AKGLLNK FPYYD+LTYVFGRDR T
Subjt:  MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMV-----------------------------RFGQSHPAAKGLLNKSFPYYDKLTYVFGRDRVT

Query:  DRFAETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS
         RFAETFA+VG NEP G YD F +GDGN+EFPPVYS
Subjt:  DRFAETFADVGFNEP-GEYDGFAIGDGNEEFPPVYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACCTCAAACTGTGCCCTGAGACATGTTTGGACGAAGGAGGAGGATGACACTCTTGTGGAGTGTTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCAGATAAT
GGTACGTTTCGGCCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAATCGTTTCCGTATTACGACAAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGATCGGT
TTGCTGAGACATTTGCCGACGTGGGCTTTAACGAGCCTGGCGAGTATGACGGATTTGCTATAGGGGATGGAAACGAGGAGTTCCCACCTGTGTACAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACCTCAAACTGTGCCCTGAGACATGTTTGGACGAAGGAGGAGGATGACACTCTTGTGGAGTGTTTAATGGAGTTGGTGTCAATGGGGGATGGAAATCAGATAAT
GGTACGTTTCGGCCAGTCGCATCCTGCAGCGAAGGGACTCCTGAACAAATCGTTTCCGTATTACGACAAACTTACATATGTGTTCGGTCGCGATAGGGTGACGGATCGGT
TTGCTGAGACATTTGCCGACGTGGGCTTTAACGAGCCTGGCGAGTATGACGGATTTGCTATAGGGGATGGAAACGAGGAGTTCCCACCTGTGTACAGCTAG
Protein sequenceShow/hide protein sequence
MSTSNCALRHVWTKEEDDTLVECLMELVSMGDGNQIMVRFGQSHPAAKGLLNKSFPYYDKLTYVFGRDRVTDRFAETFADVGFNEPGEYDGFAIGDGNEEFPPVYS