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IVF0015524 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015524
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:17846645..17847007
RNA-Seq ExpressionIVF0015524
SyntenyIVF0015524
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041115.1 hypothetical protein E6C27_scaffold128G00180 [Cucumis melo var. makuwa]1.76e-3196.49Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN
        MIKRCSHHSILGCV TEQFYFGLSKDT+QFVDAVFTGGMLRSSYSQVKTALNTKPNN
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.30e-2550.83Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNK-------------------DKGKLKDGMDRNVMVALQGQVIE
        MIKRC HH I  CVL EQFYFGLSK+T Q  + VFTGGMLRSSY+Q+K  L+T  +N                    ++G+++DG+D ++MVALQGQVIE
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNK-------------------DKGKLKDGMDRNVMVALQGQVIE

Query:  MNKLFQYMTLSQESAMGSSV
        MN + Q M L Q + + SSV
Subjt:  MNKLFQYMTLSQESAMGSSV

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]1.61e-2547.32Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN-----------KDKGKLKDGMDRNVMVALQGQVIEMNKLFQYM
        ++K C  H I  CV  E FYFGLSKDT Q V+ +F GGMLRSSY+Q+K  L++  NN           + +G+ K+G+D++V+V LQGQ+I MN L Q M
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN-----------KDKGKLKDGMDRNVMVALQGQVIEMNKLFQYM

Query:  TLSQESAMGSSV
        TLSQ +A  + +
Subjt:  TLSQESAMGSSV

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]2.23e-3151.67Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALN-------------------TKPNNKDKGKLKDGMDRNVMVALQGQVIE
        M+K C HH+ILGCV+ EQFYFGLS+DTQQFVDAVF GGMLR S + +KT L+                   +K N ++KG+   G + N M+ LQ QV E
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALN-------------------TKPNNKDKGKLKDGMDRNVMVALQGQVIE

Query:  MNKLFQYMTLSQESAMGSSV
        MNKL Q M LSQ +A+GSS+
Subjt:  MNKLFQYMTLSQESAMGSSV

TYK21909.1 hypothetical protein E5676_scaffold494G00470 [Cucumis melo var. makuwa]3.72e-33100Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN
        MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein4.9e-1947.32Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN-----------KDKGKLKDGMDRNVMVALQGQVIEMNKLFQYM
        ++K C  H I  CV  E FYFGLSKDT Q V+ +F GGMLRSSY+Q+K  L++  NN           + +G+ K+G+D++V+V LQGQ+I MN L Q M
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN-----------KDKGKLKDGMDRNVMVALQGQVIEMNKLFQYM

Query:  TLSQESAMGSSV
        TLSQ +A  + +
Subjt:  TLSQESAMGSSV

A0A0A0L0Y4 Uncharacterized protein3.3e-2351.67Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALN-------------------TKPNNKDKGKLKDGMDRNVMVALQGQVIE
        M+K C HH+ILGCV+ EQFYFGLS+DTQQFVDAVF GGMLR S + +KT L+                   +K N ++KG+   G + N M+ LQ QV E
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALN-------------------TKPNNKDKGKLKDGMDRNVMVALQGQVIE

Query:  MNKLFQYMTLSQESAMGSSV
        MNKL Q M LSQ +A+GSS+
Subjt:  MNKLFQYMTLSQESAMGSSV

A0A5A7TI80 Uncharacterized protein7.4e-2391.67Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNKDK
        MIKRCSHHSILGCV TEQFYFGLSKDT+QFVDAVFTGGMLRSSYSQVKTALNTKPNN ++
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNKDK

A0A5D3CC26 Uncharacterized protein1.5e-2050.83Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNK-------------------DKGKLKDGMDRNVMVALQGQVIE
        MIKRC HH I  CVL EQFYFGLSK+T Q  + VFTGGMLRSSY+Q+K  L+T  +N                    ++G+++DG+D ++MVALQGQVIE
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNK-------------------DKGKLKDGMDRNVMVALQGQVIE

Query:  MNKLFQYMTLSQESAMGSSV
        MN + Q M L Q + + SSV
Subjt:  MNKLFQYMTLSQESAMGSSV

A0A5D3DEY4 Uncharacterized protein3.9e-2495Show/hide
Query:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNKDK
        MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNN ++
Subjt:  MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNKDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGAGATGCTCTCACCACAGCATTCTTGGATGTGTTCTTACTGAGCAGTTCTATTTTGGGCTGAGCAAGGACACACAACAATTTGTTGACGCTGTGTTTACAGG
TGGGATGTTAAGATCATCCTATAGCCAAGTCAAAACTGCGCTGAACACTAAGCCCAACAATAAAGATAAGGGAAAGTTAAAAGATGGAATGGATAGAAACGTAATGGTGG
CGTTACAAGGTCAAGTCATCGAAATGAACAAGCTTTTTCAATATATGACATTATCGCAGGAGAGTGCTATGGGGAGCTCCGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGAGATGCTCTCACCACAGCATTCTTGGATGTGTTCTTACTGAGCAGTTCTATTTTGGGCTGAGCAAGGACACACAACAATTTGTTGACGCTGTGTTTACAGG
TGGGATGTTAAGATCATCCTATAGCCAAGTCAAAACTGCGCTGAACACTAAGCCCAACAATAAAGATAAGGGAAAGTTAAAAGATGGAATGGATAGAAACGTAATGGTGG
CGTTACAAGGTCAAGTCATCGAAATGAACAAGCTTTTTCAATATATGACATTATCGCAGGAGAGTGCTATGGGGAGCTCCGTTTAG
Protein sequenceShow/hide protein sequence
MIKRCSHHSILGCVLTEQFYFGLSKDTQQFVDAVFTGGMLRSSYSQVKTALNTKPNNKDKGKLKDGMDRNVMVALQGQVIEMNKLFQYMTLSQESAMGSSV