CuGenDBv2

Gene ID	IVF0015551
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	DNA ligase 1
Genome location	chr01:28282423..28285563
RNA-Seq Expression	IVF0015551
Synteny	IVF0015551
Gene Ontology terms	NA
InterPro domains	IPR013730 - Fyv7/TAP26

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6593160.1 hypothetical protein SDJN03_12636, partial [Cucurbita argyrosperma subsp. sororia]

1.77e-104

88.48

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKN  GK E + RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN QNERPSSS+VGLVEGENE  
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_004136058.2 uncharacterized protein LOC101216293 [Cucumis sativus]

9.74e-118

96.34

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTN RCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_008451439.1 PREDICTED: uncharacterized protein LOC103492733 [Cucumis melo]

1.57e-123

99.48

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_022960530.1 uncharacterized protein LOC111461241 [Cucurbita moschata]

1.24e-104

88.48

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKN  GK E + RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN QNERPSSS+VGLVEGENE K
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

XP_038876713.1 uncharacterized protein LOC120069103 [Benincasa hispida]

1.57e-105

89.58

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKNP GK E +NRS SKFM + KH N+KRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHV+KYKKLVK+QNQQNERPSSSTVGLVE ENETK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIG-ASTNH
        FEN TNGR GKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKMFKRTQKGQPVMKYRIEHLLETIG AS  H
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIG-ASTNH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7L3 Uncharacterized protein

7.0e-91

96.34

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MK+ NGKHEH NRSKSKFMN NKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQ NERPSSSTV LVEGENETK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTN RCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A1S3BRH3 uncharacterized protein LOC103492733

2.7e-95

99.48

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGK LSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A6J1GP14 uncharacterized protein LOC111455827

1.3e-76

85.26

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MK   G+ E +NR KS FM   KH N+KRLGGKGLSLEAFAN KSTTDYYNPALIKKQREFYKNAKHV+KYKKLVKHQN  NERPSSSTVGLVEGEN TK
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTN
         ENQTNGR GKERNKG+PSLQ LYERKHEEKEKARMEKEAIIAAKKEE+ERAKARRN+TREKM KRTQKGQPVMKYRIEHLL+TIGAS N
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTN

A0A6J1H9B9 uncharacterized protein LOC111461241

6.6e-81

88.48

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKN  GK E + RSKSKFM  NKH N+KRLGGKG S +AFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQN QNERPSSS+VGLVEGENE K
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

A0A6J1KV89 uncharacterized protein LOC111497895

1.2e-79

87.43

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Query:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK
        MKN  GK E + RSKSKF   NKH N+KRLGGKG S +AFANAKSTTDYYNPA IKKQREFYKNAKHVNKYKKLVKHQN QNERPS+STVGLVEGENE K
Subjt:  MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETK

Query:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH
        FEN+TNGR G ERNKGVPSLQ LYERKH+EKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS NH
Subjt:  FENQTNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G03180.1 CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink).

2.5e-32

45.65

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Query:  NGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQ
        N  HE     KSK   T K  N++RLGG GLSL+ FAN KS  + YNP+LIKKQ+EFYKNAK+V+K++K +K QN  ++  +  T  + + +++ K + +
Subjt:  NGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQ

Query:  TNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS
        +N R G         ++ LY++  EE E+ R E+EA+  AKKE +E A++RR   + KM ++T+ GQPVMKYRIEHLLE+I  S
Subjt:  TNGRCGKERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGAS

Sequences

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CDS sequence

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ATGAAGAATCCCAATGGAAAACACGAACATAAGAATCGCTCCAAATCGAAATTCATGAACACCAACAAACACAATAACATTAAACGATTGGGAGGGAAGGGCCTTTCGCT
TGAGGCATTCGCGAACGCTAAATCAACTACCGATTACTATAATCCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCCAAACATGTCAACAAGTATAAGAAGT
TAGTAAAGCATCAGAATCAACAGAATGAGAGGCCTTCTAGCTCTACTGTTGGACTTGTGGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGGTAGATGTGGT
AAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATGAGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAAAAGGA
AGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAAAAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAGA
CTATTGGAGCCTCAACGAACCACTAA

mRNA sequence

Show/hide mRNA sequence

TTATATTTCTTCTTCGTTTTTGACCTAATTCTTCTCAATTTCTTTCATTCTCTCTCTCTCCAACACAATGAAGAATCCCAATGGAAAACACGAACATAAGAATCGCTCCA
AATCGAAATTCATGAACACCAACAAACACAATAACATTAAACGATTGGGAGGGAAGGGCCTTTCGCTTGAGGCATTCGCGAACGCTAAATCAACTACCGATTACTATAAT
CCAGCTTTGATAAAAAAGCAAAGAGAGTTCTATAAGAATGCCAAACATGTCAACAAGTATAAGAAGTTAGTAAAGCATCAGAATCAACAGAATGAGAGGCCTTCTAGCTC
TACTGTTGGACTTGTGGAGGGTGAAAATGAAACCAAATTCGAGAATCAGACGAACGGTAGATGTGGTAAAGAAAGGAATAAAGGTGTACCTAGTCTTCAGGCACTGTATG
AGAGAAAGCATGAAGAGAAAGAGAAAGCAAGAATGGAGAAAGAAGCCATTATCGCTGCGAAAAAGGAAGAACGAGAAAGGGCTAAGGCTAGACGAAACTCCACAAGAGAA
AAAATGTTCAAAAGGACACAAAAAGGTCAGCCAGTTATGAAGTACAGAATTGAGCATCTTTTGGAGACTATTGGAGCCTCAACGAACCACTAAGGCCTTTTGTTGTTTTC
ACTGAATTTTGTAGAAGAGTTTTTTGTCCCTTTAGGAAATGTATATTATATTCTCTTGTACCTTTTTAGTTTGCTTCATTATACAATCAAACGATTCCAGTGTATTACAA
TTTTTAGTCTAATCTAAATCATCCATTTGCTTAATATAATCATATTGCCG

Protein sequence

Show/hide protein sequence

MKNPNGKHEHKNRSKSKFMNTNKHNNIKRLGGKGLSLEAFANAKSTTDYYNPALIKKQREFYKNAKHVNKYKKLVKHQNQQNERPSSSTVGLVEGENETKFENQTNGRCG
KERNKGVPSLQALYERKHEEKEKARMEKEAIIAAKKEERERAKARRNSTREKMFKRTQKGQPVMKYRIEHLLETIGASTNH

IVF0015551 (gene) of Melon (IVF77) v1 genome