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IVF0015557 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015557
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:6806443..6806888
RNA-Seq ExpressionIVF0015557
SyntenyIVF0015557
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032006.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.76e-9491.89Show/hide
Query:  MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR
        MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW            NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR
Subjt:  MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR

Query:  WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ
        WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ
Subjt:  WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.68e-2239.83Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P AL R++I  KYK  Y G+IP     ++S+APW            N  W++NNG+ + F Y NW+    L  A+P+ FAL++DK+ T+KD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTW
         WT+ F R LN+RE N W
Subjt:  AWTLDFIRTLNERETNTW

KAA0058554.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.34e-2138.02Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P++L R++I  KYK  + G+IP     +SS+APW            N+ W++NNG+ + F Y NW+    L  A+P+ FAL++DK ++IKD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYI
         W + F R LN+RE +TW  I
Subjt:  AWTLDFIRTLNERETNTWNYI

TYK11012.1 uncharacterized protein E5676_scaffold874G00540 [Cucumis melo var. makuwa]4.50e-2137.19Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P+AL R++I  KYK  + G+IP  +  +SS+APW            N  W++NNG+ + F Y NW+    L  A+P+ FAL +DK  ++KD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYI
         W ++F R LN+RE   W  I
Subjt:  AWTLDFIRTLNERETNTWNYI

TYK19414.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.07e-4259.84Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P AL RKVI+ KY+A++AGEIP KSK+NSSR PW            NYK +VNNG NL F Y NWTNR PL+KAF + FALA DKNATIKD WD   K
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYIKGDSIF
         WTL+  R LNERETNTWN    D +F
Subjt:  AWTLDFIRTLNERETNTWNYIKGDSIF

TrEMBL top hitse value%identityAlignment
A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein5.1e-1939.83Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P AL R++I  KYK  Y G+IP     ++S+APW            N  W++NNG+ + F Y NW+    L  A+P+ FAL++DK+ T+KD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTW
         WT+ F R LN+RE N W
Subjt:  AWTLDFIRTLNERETNTW

A0A5A7UTS4 LINE-1 retrotransposable element ORF2 protein3.3e-1838.02Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P++L R++I  KYK  + G+IP     +SS+APW            N+ W++NNG+ + F Y NW+    L  A+P+ FAL++DK ++IKD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYI
         W + F R LN+RE +TW  I
Subjt:  AWTLDFIRTLNERETNTWNYI

A0A5A7UV84 Reverse transcriptase domain-containing protein5.6e-1837.19Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P+AL R++I  KYK  + G+IP  +  +SS+APW            N  W++NNG+ + F Y NW+    L  A+P+ FAL +DK  ++KD W+    
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYI
         W ++F R LN+RE   W  I
Subjt:  AWTLDFIRTLNERETNTWNYI

A0A5D3CYF8 LINE-1 retrotransposable element ORF2 protein8.8e-7291.89Show/hide
Query:  MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR
        MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW            NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR
Subjt:  MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDR

Query:  WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ
        WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ
Subjt:  WDYARKAWTLDFIRTLNERETNTWNYIKGDSIFSTRKRMQQANMESQQ

A0A5D3D793 LINE-1 retrotransposable element ORF2 protein4.7e-3358.78Show/hide
Query:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK
        ++P AL RKVI+ KY+A++AGEIP KSK+NSSR PW            NYK +VNNG NL F Y NWTNR PL+KAF + FALA DKNATIKD WD   K
Subjt:  NQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPW------------NYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARK

Query:  AWTLDFIRTLNERETNTWNYIKGDSIFSTRK
         WTL+  R LNERETNTWN    D +F   K
Subjt:  AWTLDFIRTLNERETNTWNYIKGDSIFSTRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTGGTGCTTCCAAACCAGCCTCATGCTCTTTCGAGAAAAGTTATCTCAGGAAAATATAAAGCTTCCTATGCTGGAGAAATCCCCTATAAAAGTAAACACAACAG
CTCTAGAGCTCCTTGGAACTACAAGTGGGAGGTCAACAATGGCGAAAATCTATGCTTCTTGTATAAAAATTGGACTAACAGGGACCCACTTTTCAAAGCTTTTCCTAAAA
CGTTTGCCTTAGCCATTGACAAAAATGCAACCATAAAAGATAGATGGGATTATGCTCGTAAGGCGTGGACTTTGGACTTCATAAGAACTTTGAATGAAAGGGAAACAAAC
ACATGGAACTACATTAAAGGTGATTCAATTTTCTCTACCAGAAAAAGGATGCAGCAAGCCAATATGGAATCTCAACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTGGTGCTTCCAAACCAGCCTCATGCTCTTTCGAGAAAAGTTATCTCAGGAAAATATAAAGCTTCCTATGCTGGAGAAATCCCCTATAAAAGTAAACACAACAG
CTCTAGAGCTCCTTGGAACTACAAGTGGGAGGTCAACAATGGCGAAAATCTATGCTTCTTGTATAAAAATTGGACTAACAGGGACCCACTTTTCAAAGCTTTTCCTAAAA
CGTTTGCCTTAGCCATTGACAAAAATGCAACCATAAAAGATAGATGGGATTATGCTCGTAAGGCGTGGACTTTGGACTTCATAAGAACTTTGAATGAAAGGGAAACAAAC
ACATGGAACTACATTAAAGGTGATTCAATTTTCTCTACCAGAAAAAGGATGCAGCAAGCCAATATGGAATCTCAACAGTGA
Protein sequenceShow/hide protein sequence
MALVLPNQPHALSRKVISGKYKASYAGEIPYKSKHNSSRAPWNYKWEVNNGENLCFLYKNWTNRDPLFKAFPKTFALAIDKNATIKDRWDYARKAWTLDFIRTLNERETN
TWNYIKGDSIFSTRKRMQQANMESQQ