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IVF0015567 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015567
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr03:4290986..4291279
RNA-Seq ExpressionIVF0015567
SyntenyIVF0015567
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032726.1 drebrin-like [Cucumis melo var. makuwa]1.21e-1650.56Show/hide
Query:  KASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ
        K SLP  PK T +   + +K KE   E E+E  E ++FKF+DHY+C  +E+GFE+VI+CQ   +EM   S KQL DLELK +NANA+ Q
Subjt:  KASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ

KAA0049656.1 hypothetical protein E6C27_scaffold163G001250 [Cucumis melo var. makuwa]1.59e-1662.3Show/hide
Query:  EEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ
        EEE    YVFKF+D ++CK +ERGFE+  QCQ  LQEM LRS KQ++DLELK+DNA+A +Q
Subjt:  EEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ

KAA0054903.1 hypothetical protein E6C27_scaffold43052G00310 [Cucumis melo var. makuwa]6.62e-62100Show/hide
Query:  MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT
        MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT
Subjt:  MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT

KAE8646246.1 hypothetical protein Csa_023826, partial [Cucumis sativus]4.55e-1954.95Show/hide
Query:  SKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYE-DYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNAN
        SK  G+  LP LP    +A  QN K KE + E   E  + DY+F F++H+VCK ME GFE++IQ Q  LQEM L S KQL+DLELKVDNAN
Subjt:  SKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYE-DYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNAN

TYK23271.1 hypothetical protein E5676_scaffold142G003250 [Cucumis melo var. makuwa]1.30e-1852.17Show/hide
Query:  TSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANA
        TS+V  K SLP  PK T K  TQN KQKE   + +++  +DY FKF+D  VCK +  GF++V QCQ  LQEM  R  KQ   LELKVDN  A
Subjt:  TSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANA

TrEMBL top hitse value%identityAlignment
A0A5A7SRQ1 Drebrin-like5.1e-1350.56Show/hide
Query:  KASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ
        K SLP  PK T +   + +K KE   E E+E  E ++FKF+DHY+C  +E+GFE+VI+CQ   +EM   S KQL DLELK +NANA+ Q
Subjt:  KASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ

A0A5D3D645 Uncharacterized protein2.1e-1162.3Show/hide
Query:  EEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ
        EEE    YVFKF+D ++CK +ERGFE+  QCQ  LQEM LRS KQ++DLELK+DNA+A +Q
Subjt:  EEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQ

A0A5D3DG66 Uncharacterized protein3.1e-47100Show/hide
Query:  MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT
        MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT
Subjt:  MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT

A0A5D3DHY1 Uncharacterized protein3.9e-1352.17Show/hide
Query:  TSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANA
        TS+V  K SLP  PK T K  TQN KQKE   + +++  +DY FKF+D  VCK +  GF++V QCQ  LQEM  R  KQ   LELKVDN  A
Subjt:  TSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANA

A0A5D3DZP5 Uncharacterized protein8.6e-1357.83Show/hide
Query:  KVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLEL
        KVDG+ SLP  PK   KA TQN + KE+V E EEE  E+Y  KF+D YVCK M  GFE+VIQC+  LQEMHL   KQ + L L
Subjt:  KVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTCTAAGGTCGATGGCAAAGCAAGCCTACCTCTACTACCAAAAGGAACTCCAAAGGCCTTAACGCAGAACTTCAAACAAAAGGAGATGGTAATTGAATATGAAGA
AGAGTATTACGAGGATTACGTCTTCAAGTTTCTTGATCATTACGTCTGCAAGCTAATGGAAAGGGGATTTGAAAACGTAATTCAATGTCAGAGAACCCTGCAAGAAATGC
ATTTGCGAAGTCACAAGCAATTAAACGATTTGGAACTCAAGGTTGACAATGCAAATGCTCACCACCAAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTCTAAGGTCGATGGCAAAGCAAGCCTACCTCTACTACCAAAAGGAACTCCAAAGGCCTTAACGCAGAACTTCAAACAAAAGGAGATGGTAATTGAATATGAAGA
AGAGTATTACGAGGATTACGTCTTCAAGTTTCTTGATCATTACGTCTGCAAGCTAATGGAAAGGGGATTTGAAAACGTAATTCAATGTCAGAGAACCCTGCAAGAAATGC
ATTTGCGAAGTCACAAGCAATTAAACGATTTGGAACTCAAGGTTGACAATGCAAATGCTCACCACCAAACTTAG
Protein sequenceShow/hide protein sequence
MTSKVDGKASLPLLPKGTPKALTQNFKQKEMVIEYEEEYYEDYVFKFLDHYVCKLMERGFENVIQCQRTLQEMHLRSHKQLNDLELKVDNANAHHQT