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IVF0015574 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015574
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr12:9507708..9508010
RNA-Seq ExpressionIVF0015574
SyntenyIVF0015574
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025808.1 reverse transcriptase [Cucumis melo var. makuwa]4.02e-4470.71Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFR GDQVL+KL+   ++FR  KDQ L+RKYEGPVEVLKK++NTSYRV LP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

KAA0032476.1 reverse transcriptase [Cucumis melo var. makuwa]1.94e-4572.73Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRV LP WMKIYPV+HVSNL+PYH D +D Q N   RP+IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

KAA0038841.1 reverse transcriptase [Cucumis melo var. makuwa]5.37e-4572.73Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRV LP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

KAA0050844.1 reverse transcriptase [Cucumis melo var. makuwa]3.56e-4472.73Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRV LP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

KAA0065924.1 reverse transcriptase [Cucumis melo var. makuwa]3.80e-69100Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK
        MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK

TrEMBL top hitse value%identityAlignment
A0A5A7TU11 Reverse transcriptase8.3e-3573.74Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRVVLP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

A0A5A7UD54 Reverse transcriptase8.3e-3573.74Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRVVLP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

A0A5A7VF46 Reverse transcriptase3.3e-52100Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK
        MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK

A0A5D3C4R1 Reverse transcriptase1.1e-3472.73Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRAGDQVL+KL+   +RFR  KDQ L+RKYEGPVEVLKK+ NTSYRV LP WMKIYPV+HVSNL+PYH D +D Q N   RP+IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

A0A5D3C8Z6 Reverse transcriptase2.8e-3572.73Show/hide
Query:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL
        MKKWAD KRR LEFRA DQVL+KL+   +RFR HKDQHL+RKYEGP++VLKK+ NTSYRVVLP WMKIYPV+HVSNL+PYH D +D Q N   RP IDL
Subjt:  MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGTGGGCTGATACGAAGCGACGATCTCTCGAATTTCGTGCAGGAGATCAAGTCCTCGTCAAACTGAAAGCAGGACATATTCGATTTAGAAGACATAAAGACCA
GCACCTCATCAGGAAATATGAAGGGCCTGTGGAAGTCCTCAAAAAGATACAGAACACATCATATAGGGTGGTGTTGCCTGCATGGATGAAAATCTATCCAGTAGTTCATG
TAAGCAACTTAAGACCCTACCATCATGACCCTGATGACAAGCAGTGCAACGACTGTGTTCGACCATCTATCGACCTGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGTGGGCTGATACGAAGCGACGATCTCTCGAATTTCGTGCAGGAGATCAAGTCCTCGTCAAACTGAAAGCAGGACATATTCGATTTAGAAGACATAAAGACCA
GCACCTCATCAGGAAATATGAAGGGCCTGTGGAAGTCCTCAAAAAGATACAGAACACATCATATAGGGTGGTGTTGCCTGCATGGATGAAAATCTATCCAGTAGTTCATG
TAAGCAACTTAAGACCCTACCATCATGACCCTGATGACAAGCAGTGCAACGACTGTGTTCGACCATCTATCGACCTGAAATAG
Protein sequenceShow/hide protein sequence
MKKWADTKRRSLEFRAGDQVLVKLKAGHIRFRRHKDQHLIRKYEGPVEVLKKIQNTSYRVVLPAWMKIYPVVHVSNLRPYHHDPDDKQCNDCVRPSIDLK