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IVF0015600 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015600
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr09:7676775..7677251
RNA-Seq ExpressionIVF0015600
SyntenyIVF0015600
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]9.43e-3457.6Show/hide
Query:  KFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTP
        +FP D E+ +AIE L WDYCEEE Y+ELF+T+EF EE+   YILKEVN VSG+  FESLDLQTKG+ KT+ SIEEPPKLELK LPNHLK           
Subjt:  KFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTP

Query:  QEGISLSHCMHKIRLEEGQAVTIQF
                      LEEGQ  TIQF
Subjt:  QEGISLSHCMHKIRLEEGQAVTIQF

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]2.72e-52100Show/hide
Query:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK
        FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK
Subjt:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK

KAA0048593.1 uncharacterized protein E6C27_scaffold61G002390 [Cucumis melo var. makuwa]9.96e-4465.35Show/hide
Query:  PIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTPQE
        PI +   N  E    DYCEEE YYELFS +EFLEE+ P YIL++VN VS K KFESLDLQ KGE KT+ SIEEPP+L+LKPLPN+LKREG+IEYVK PQE
Subjt:  PIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTPQE

Query:  G----------ISLSHCMHKIRLEEGQ
        G          IS S+ MHKIRLEEGQ
Subjt:  G----------ISLSHCMHKIRLEEGQ

KAA0052866.1 uncharacterized protein E6C27_scaffold33G00230 [Cucumis melo var. makuwa]2.63e-4255.77Show/hide
Query:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK----REGI----
        FP D E+CN IE LGW+Y E+EAY ELFST+EF EED P YILKEVN VS + KFESLDLQ KGE KT+ SIEEPP+LELK LPNHLK    RE      
Subjt:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK----REGI----

Query:  ------------------------IEYVKTPQEGISLSHCMHKIRLEEGQAVTIQF
                                IE+     +GIS S+CMHK+RLEEGQ  TIQF
Subjt:  ------------------------IEYVKTPQEGISLSHCMHKIRLEEGQAVTIQF

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]3.42e-3559.48Show/hide
Query:  MKFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIE----
        MKFP +    NAIE LGWDYC+EE Y+ELFST+EF EE+ P YIL+EVN + GK KFESLDL+TKG+ K ++SIEEPP++ELKPLPNHLK   + E    
Subjt:  MKFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIE----

Query:  YV-KTPQEGISLSHCM
        Y+ K P+   S S C+
Subjt:  YV-KTPQEGISLSHCM

TrEMBL top hitse value%identityAlignment
A0A5A7T4Y2 Uncharacterized protein4.7e-2757.6Show/hide
Query:  KFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTP
        +FP D E+ +AIE L WDYCEEE Y+ELF+T+EF EE+   YILKEVN VSG+  FESLDLQTKG+ KT+ SIEEPPKLELK LPNHLK           
Subjt:  KFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTP

Query:  QEGISLSHCMHKIRLEEGQAVTIQF
                      LEEGQ  TIQF
Subjt:  QEGISLSHCMHKIRLEEGQAVTIQF

A0A5A7UE99 Uncharacterized protein2.8e-2768.89Show/hide
Query:  MKFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK
        MKFP +    NAIE LGWDYC+EE Y+ELFST+EF EE+ P YIL+EVN + GK KFESLDL+TKG+ K ++SIEEPP++ELKPLPNHLK
Subjt:  MKFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK

A0A5A7UF79 Uncharacterized protein3.0e-3454.49Show/hide
Query:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK------------
        FP D E+CN IE LGW+Y E+EAY ELFST+EF EED P YILKEVN VS + KFESLDLQ KGE KT+ SIEEPP+LELK LPNHLK            
Subjt:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK------------

Query:  --------------------REGIIEYVKTPQEGISLSHCMHKIRLEEGQAVTIQF
                             +  IE+     +GIS S+CMHK+RLEEGQ  TIQF
Subjt:  --------------------REGIIEYVKTPQEGISLSHCMHKIRLEEGQAVTIQF

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein4.7e-43100Show/hide
Query:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK
        FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK
Subjt:  FPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLK

A0A5D3DV59 Uncharacterized protein2.1e-3565.35Show/hide
Query:  PIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTPQE
        PI +   N  E    DYCEEE YYELFS +EFLEE+ P YIL++VN VS K KFESLDLQ KGE KT+ SIEEPP+L+LKPLPN+LKREG+IEYVK PQE
Subjt:  PIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTPQE

Query:  ----------GISLSHCMHKIRLEEGQ
                  GIS S+ MHKIRLEEGQ
Subjt:  ----------GISLSHCMHKIRLEEGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCCCATCGATGTTGAAAGCTGTAACGCGATAGAGTGCCTTGGATGGGACTATTGCGAGGAAGAAGCCTATTATGAGTTGTTTAGCACTAAAGAATTCCTTGA
AGAAGATAAACCATACTATATACTGAAAGAAGTAAACACCGTGTCTGGCAAAAATAAGTTTGAGTCTTTGGATTTACAAACCAAAGGCGAAAATAAGACACAAGCATCAA
TTGAAGAACCACCAAAATTAGAGCTTAAGCCTTTGCCCAACCACCTAAAAAGAGAAGGCATTATTGAATATGTTAAAACGCCACAAGAAGGCATAAGCCTATCCCATTGC
ATGCATAAGATCAGGTTGGAAGAGGGTCAAGCAGTTACCATTCAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCCCATCGATGTTGAAAGCTGTAACGCGATAGAGTGCCTTGGATGGGACTATTGCGAGGAAGAAGCCTATTATGAGTTGTTTAGCACTAAAGAATTCCTTGA
AGAAGATAAACCATACTATATACTGAAAGAAGTAAACACCGTGTCTGGCAAAAATAAGTTTGAGTCTTTGGATTTACAAACCAAAGGCGAAAATAAGACACAAGCATCAA
TTGAAGAACCACCAAAATTAGAGCTTAAGCCTTTGCCCAACCACCTAAAAAGAGAAGGCATTATTGAATATGTTAAAACGCCACAAGAAGGCATAAGCCTATCCCATTGC
ATGCATAAGATCAGGTTGGAAGAGGGTCAAGCAGTTACCATTCAGTTTTAA
Protein sequenceShow/hide protein sequence
MKFPIDVESCNAIECLGWDYCEEEAYYELFSTKEFLEEDKPYYILKEVNTVSGKNKFESLDLQTKGENKTQASIEEPPKLELKPLPNHLKREGIIEYVKTPQEGISLSHC
MHKIRLEEGQAVTIQF