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IVF0015603 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015603
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNERD domain-containing protein
Genome locationchr04:37564..38189
RNA-Seq ExpressionIVF0015603
SyntenyIVF0015603
Gene Ontology termsGO:0005840 - ribosome (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605718.1 hypothetical protein SDJN03_03035, partial [Cucurbita argyrosperma subsp. sororia]1.70e-3782.35Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREI+RSKVSCI+IQK+R +GF PSR RVLYSTR+Y+N+G SASEWKE+T+GS+TMVVFQMEYSSKVRK+KISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
XP_004148346.1 uncharacterized protein LOC101206635 isoform X1 [Cucumis sativus]5.65e-4598.82Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRN+GASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
XP_022157167.1 uncharacterized protein LOC111023945 [Momordica charantia]1.09e-3885.88Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS RDYRNDGASASEWKEVTVGSST+VVFQMEYSSKVRK+KIS+I SLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
XP_022957721.1 uncharacterized protein LOC111459180 [Cucurbita moschata]6.07e-3883.53Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREI+RSKVSCI+IQK+R IGF PSR RVLYSTR+Y+N+G SASEWKE+T+GS+TMVVFQMEYSSKVRK+KISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
XP_022995191.1 uncharacterized protein LOC111490811 [Cucurbita maxima]6.07e-3883.53Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREI+RSKVSCI+IQK+R IGF PSR RVLYSTR+Y+N+G SASEWKE+T+GS+TMVVFQMEYSSKVRK+KISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
TrEMBL top hitse value%identityAlignment
A0A0A0LKG9 NERD domain-containing protein5.4e-3598.82Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRN+GASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
A0A314UKK8 Uncharacterized protein4.9e-2065.88Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        ++ALR I+RSK+S +++QK   +GF PSR +VLYS RDYR+DGASASEWKEV V SST V+FQ E S K+RK K+SSIVS+SLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
A0A6J1DTU9 uncharacterized protein LOC1110239454.0e-3085.88Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALR+I+RSKVSCI+IQ++R I FVPSRFRVLYS RDYRNDGASASEWKEVTVGSST+VVFQMEYSSKVRK+KIS+I SLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
A0A6J1H014 uncharacterized protein LOC1114591801.5e-2983.53Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREI+RSKVSCI+IQK+R IGF PSR RVLYSTR+Y+N+G SASEWKE+T+GS+TMVVFQMEYSSKVRK+KISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
A0A6J1K1B0 uncharacterized protein LOC1114908111.5e-2983.53Show/hide
Query:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        MQALREI+RSKVSCI+IQK+R IGF PSR RVLYSTR+Y+N+G SASEWKE+T+GS+TMVVFQMEYSSKVRK+KISSIVSLSLSA
Subjt:  MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65020.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NERD (InterPro:IPR011528); Has 69 Blast hits to 69 proteins in 27 species: Archae - 0; Bacteria - 18; Metazoa - 8; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).3.5e-1859.04Show/hide
Query:  ALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA
        ALR I+RSKV  + IQK    G  PSR +VLYS RDYR++G+S +E KEVTV SST V+FQ   S+K++K K+SS+VS+SLSA
Subjt:  ALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGGCTTTAAGAGAGATTAGAAGATCAAAAGTTAGTTGCATACTCATCCAGAAGATCAGAAGGATCGGATTTGTTCCTTCAAGATTTCGAGTTTTATACTCCACCCG
GGATTATCGAAACGATGGGGCATCTGCTTCTGAGTGGAAGGAAGTAACAGTAGGATCTAGCACAATGGTAGTATTTCAGATGGAATATTCTTCTAAAGTTCGAAAAGTCA
AGATCTCTTCAATCGTATCTCTATCATTGAGTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGGCTTTAAGAGAGATTAGAAGATCAAAAGTTAGTTGCATACTCATCCAGAAGATCAGAAGGATCGGATTTGTTCCTTCAAGATTTCGAGTTTTATACTCCACCCG
GGATTATCGAAACGATGGGGCATCTGCTTCTGAGTGGAAGGAAGTAACAGTAGGATCTAGCACAATGGTAGTATTTCAGATGGAATATTCTTCTAAAGTTCGAAAAGTCA
AGATCTCTTCAATCGTATCTCTATCATTGAGTGCCTGA
Protein sequenceShow/hide protein sequence
MQALREIRRSKVSCILIQKIRRIGFVPSRFRVLYSTRDYRNDGASASEWKEVTVGSSTMVVFQMEYSSKVRKVKISSIVSLSLSA