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IVF0015638 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015638
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:8493531..8493848
RNA-Seq ExpressionIVF0015638
SyntenyIVF0015638
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035422.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.01e-3665.38Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI
        +I F+KSIDSKCWK +I G EH S KD A K TLK +I+WSK++DEA+ GNSRALN +FNG+DQN+FK INT    KEA  ILE AYEGTS+V IS+L I
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI

Query:  LSLK
        LS K
Subjt:  LSLK

KAA0046626.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]1.58e-3973.08Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI
        MI F KSIDSK WKVVI  WEH STKD   KVTLKP+ISWSKEEDE SL NS+ALN L+NG+DQNVFKLINT TSVK+A  IL++A EGTS+V ISRL +
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI

Query:  LSLK
        LS K
Subjt:  LSLK

KAA0060245.1 gag-pol polyprotein [Cucumis melo var. makuwa]8.58e-4388.24Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM
        MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINT   + E   I+E+
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM

TYK21554.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.45e-4388.24Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM
        MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINT   + E   I+E+
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM

TYK29881.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.16e-3667.37Show/hide
Query:  SKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWILSLK
        SKCWKVV+IGWE  S KD  SK  LKPKI+W+KEEDE SLGNS ALN LFN + QNVFK+ NT TS KEA  ILE+AYEGTS++ +S+L IL+L+
Subjt:  SKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWILSLK

TrEMBL top hitse value%identityAlignment
A0A1S3CKP5 uncharacterized protein LOC1035020612.1e-2865.38Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI
        +I F+KSIDSKCWK +I G EH S KD A K TLK +I+WSK++DEA+ GNSRALN +FNG+DQN+FK INT    KEA  ILE AYEGTS+V IS+L I
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI

Query:  LSLK
        LS K
Subjt:  LSLK

A0A5A7SVY3 Gag-proteinase polyprotein2.1e-2865.38Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI
        +I F+KSIDSKCWK +I G EH S KD A K TLK +I+WSK++DEA+ GNSRALN +FNG+DQN+FK INT    KEA  ILE AYEGTS+V IS+L I
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI

Query:  LSLK
        LS K
Subjt:  LSLK

A0A5A7TXB8 Gag-proteinase polyprotein5.8e-3173.08Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI
        MI F KSIDSK WKVVI  WEH STKD   KVTLKP+ISWSKEEDE SL NS+ALN L+NG+DQNVFKLINT TSVK+A  IL++A EGTS+V ISRL +
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWI

Query:  LSLK
        LS K
Subjt:  LSLK

A0A5A7V2Z3 Gag-pol polyprotein1.1e-3288.24Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM
        MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINT   + E   I+E+
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM

A0A5D3DD91 Gag-pol polyprotein1.1e-3288.24Show/hide
Query:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM
        MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINT   + E   I+E+
Subjt:  MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTGTTTCTAAAATCTATCGATAGTAAGTGTTGGAAAGTTGTGATCATCGGATGGGAACATCTATCTACTAAGGATGCTGCTAGTAAAGTCACTCTCAAACCAAA
GATATCCTGGTCTAAAGAAGAGGATGAAGCATCTCTTGGAAACTCTCGAGCTTTAAATGTACTATTTAATGGTATAGATCAGAATGTATTTAAACTGATAAATACAGGTA
CATCAGTTAAAGAAGCATTAAAAATTTTAGAAATGGCTTATGAAGGGACATCTGAAGTTACAATATCTAGACTTTGGATTTTATCCTTAAAAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGTGTTTCTAAAATCTATCGATAGTAAGTGTTGGAAAGTTGTGATCATCGGATGGGAACATCTATCTACTAAGGATGCTGCTAGTAAAGTCACTCTCAAACCAAA
GATATCCTGGTCTAAAGAAGAGGATGAAGCATCTCTTGGAAACTCTCGAGCTTTAAATGTACTATTTAATGGTATAGATCAGAATGTATTTAAACTGATAAATACAGGTA
CATCAGTTAAAGAAGCATTAAAAATTTTAGAAATGGCTTATGAAGGGACATCTGAAGTTACAATATCTAGACTTTGGATTTTATCCTTAAAAATTTGA
Protein sequenceShow/hide protein sequence
MIVFLKSIDSKCWKVVIIGWEHLSTKDAASKVTLKPKISWSKEEDEASLGNSRALNVLFNGIDQNVFKLINTGTSVKEALKILEMAYEGTSEVTISRLWILSLKI