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IVF0015648 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015648
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPhotosystem II reaction center protein H
Genome locationchr05:17577486..17577650
RNA-Seq ExpressionIVF0015648
SyntenyIVF0015648
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0050821 - protein stabilization (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042301 - phosphate ion binding (molecular function)
InterPro domainsIPR001056 - Photosystem II reaction centre protein H
IPR036863 - Photosystem II reaction centre protein H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHM88779.1 photosystem II phosphoprotein, partial [Lagenaria siceraria]2.94e-1789.74Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
AHM91135.1 photosystem II phosphoprotein, partial [Lagenaria siceraria]2.87e-1789.74Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
YP_004841812.1 photosystem II phosphoprotein [Cucumis melo subsp. melo]3.10e-1792.31Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
YP_009346513.1 photosystem II phosphoprotein [Cucumis x hytivus]3.10e-1792.31Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
YP_010047756.1 photosystem II phosphoprotein [Pilea thymifolia]4.59e-1994.87Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSRFGSRRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
TrEMBL top hitse value%identityAlignment
A0A1S4EU35 Photosystem II reaction center protein H1.5e-1192.31Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
A0A249RZ75 Photosystem II reaction center protein H1.5e-1192.31Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
A0A286NFZ2 Photosystem II reaction center protein H1.5e-1192.31Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
A0A7U3QCE7 Photosystem II phosphoprotein6.3e-1394.87Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSRFGSRRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
A0A7U3QCP4 Photosystem II phosphoprotein6.3e-1394.87Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSSRFGSRRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
SwissProt top hitse value%identityAlignment
Q06GN1 Photosystem II reaction center protein H3.6e-1384.62Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTV+DSS+ G RRTV+GDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
Q2PMQ6 Photosystem II reaction center protein H2.7e-1387.18Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTV+D+SR G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
Q49KW9 Photosystem II reaction center protein H1.0e-1284.62Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTV+ SSR G RRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
Q4VZI9 Photosystem II reaction center protein H9.3e-1489.74Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTVDDSS+ G RRTVVGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
Q70XX9 Photosystem II reaction center protein H1.3e-1282.05Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        M TQ+V+DSSR G RRT+VGDLLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
Arabidopsis top hitse value%identityAlignment
ATCG00710.1 photosystem II reaction center protein H8.1e-1382.05Show/hide
Query:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS
        MATQTV+DSSR G R T VG LLKPLNSEYGKVAPGWG+
Subjt:  MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACACAAACCGTTGATGATAGTTCTAGATTTGGGTCAAGACGAACTGTTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGCTCACGATCTGAGAAAGAAGGCCTAATATGCATTGAACCCATTGACCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACACAAACCGTTGATGATAGTTCTAGATTTGGGTCAAGACGAACTGTTGTAGGGGATTTATTGAAACCATTGAATTCGGAATATGGTAAAGTGGCTCCTGGGTG
GGGCTCACGATCTGAGAAAGAAGGCCTAATATGCATTGAACCCATTGACCAATGA
Protein sequenceShow/hide protein sequence
MATQTVDDSSRFGSRRTVVGDLLKPLNSEYGKVAPGWGSRSEKEGLICIEPIDQ