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IVF0015668 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015668
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:6994599..6995160
RNA-Seq ExpressionIVF0015668
SyntenyIVF0015668
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037854.1 retrotransposon protein [Cucumis melo var. makuwa]8.62e-8176.88Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        MTFKI  SNVH S IDSRIKLLKRMFHA+AEMRGPTC GFGWNDEQKCIV EKEVFDDW        GLLNK FPHYDEL Y+FGKDR M GR ++FT+V
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSNDL  YEAF ADA SDT+FQ MYSQGL+MSLDELM TRT  VSEG+Y+SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]4.66e-7873.12Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        M FKI G N+H STIDSRIKL+KRMFHA+AEMRGP CSGFGWNDE+KCIVVEKE+FDDW        GLLNKSF HYDELSY+FGKDRA GGR +SFTD+
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSND   Y+AF ADAA DTNF PMYS GL+MS D+LM TRT  VSE + +SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]3.47e-8277.5Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        M FKI  SNVH STIDSRIKLLKRMFHAI EMRGPTCSGFGWNDEQKCIV EKEVFDDW        GLLNKSFPHYDELSY+F KD A GGR +SF DV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSND   Y+AF A+AASDT+FQPMYS+GL+MS DELMGTRTA VSEG+Y+SSGSK+KR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

KAA0054347.1 retrotransposon protein [Cucumis melo var. makuwa]5.72e-7976.25Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        M FKI GSNVH STIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIV EKEVFD+W        GLL K F HYDELSY+FGKDRA GG  +SF DV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSN+L  YE F A+A  DTNFQPMYSQ L+MS DELMGTR A VSEG+Y+SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

TYK05687.1 retrotransposon protein [Cucumis melo var. makuwa]3.31e-9394.52Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW        GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE
        GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE

TrEMBL top hitse value%identityAlignment
A0A5A7TZA5 Retrotransposon protein9.9e-6477.5Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        M FKI  SNVH STIDSRIKLLKRMFHAI EMRGPTCSGFGWNDEQKCIV EKEVFDDW        GLLNKSFPHYDELSY+F KD A GGR +SF DV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSND   Y+AF A+AASDT+FQPMYS+GL+MS DELMGTRTA VSEG+Y+SSGSK+KR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

A0A5A7UIE9 Retrotransposon protein2.7e-6176.25Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        M FKI GSNVH STIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIV EKEVFD+W        GLL K F HYDELSY+FGKDRA GG  +SF DV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSN+L  YE F A+A  DTNFQPMYSQ L+MS DELMGTR A VSEG+Y+SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

A0A5D3BRF0 Retrotransposon protein1.3e-6076.25Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        MTFKI GSN+H  TIDSRIKLLKRMFHAIAEM G TCSGF WNDEQKCIV EKEVFDDW        GLLNKSF HY++LSY+FGKDRAM G  +SF DV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
         SNDL+ YEAF  DAA DTNFQ MYSQGL+MS DELMGTRTA VSEG+Y+SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

A0A5D3C1J4 Retrotransposon protein3.4e-7294.52Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW        GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE
        GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSE

A0A5D3CHG6 Retrotransposon protein1.1e-6276.88Show/hide
Query:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV
        MTFKI  SNVH S IDSRIKLLKRMFHA+AEMRGPTC GFGWNDEQKCIV EKEVFDDW        GLLNK FPHYDEL Y+FGKDR M GR ++FT+V
Subjt:  MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDW--------GLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDV

Query:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG
        GSNDL  YEAF ADA SDT+FQ MYSQGL+MSLDELM TRT  VSEG+Y+SSGSKRKR G
Subjt:  GSNDLVRYEAFTADAASDTNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCTTCAAAATCCAAGGTTCTAATGTCCATGTTTCAACGATCGATAGCCGAATAAAATTATTGAAGAGAATGTTCCATGCAATTGCGGAGATGCGTGGCCCAACTTG
CAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGTCGAGAAAGAAGTCTTCGACGATTGGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGT
ACATGTTTGGAAAAGATCGTGCAATGGGAGGTCGGCCCAAGAGTTTTACGGACGTTGGGTCAAACGATCTTGTTAGGTACGAGGCATTTACCGCTGACGCTGCATCGGAT
ACGAACTTCCAGCCTATGTACAGTCAAGGATTGAGCATGTCGCTTGATGAACTGATGGGAACAAGAACCGCTCTAGTAAGTGAAGGTAAGTATATTTCGAGCGGGTCTAA
GCGGAAACGTGAAGGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACCTTCAAAATCCAAGGTTCTAATGTCCATGTTTCAACGATCGATAGCCGAATAAAATTATTGAAGAGAATGTTCCATGCAATTGCGGAGATGCGTGGCCCAACTTG
CAGTGGTTTTGGGTGGAATGATGAACAAAAATGCATCGTCGTCGAGAAAGAAGTCTTCGACGATTGGGGCCTCCTTAATAAGTCGTTTCCCCACTATGACGAACTGTCGT
ACATGTTTGGAAAAGATCGTGCAATGGGAGGTCGGCCCAAGAGTTTTACGGACGTTGGGTCAAACGATCTTGTTAGGTACGAGGCATTTACCGCTGACGCTGCATCGGAT
ACGAACTTCCAGCCTATGTACAGTCAAGGATTGAGCATGTCGCTTGATGAACTGATGGGAACAAGAACCGCTCTAGTAAGTGAAGGTAAGTATATTTCGAGCGGGTCTAA
GCGGAAACGTGAAGGATAG
Protein sequenceShow/hide protein sequence
MTFKIQGSNVHVSTIDSRIKLLKRMFHAIAEMRGPTCSGFGWNDEQKCIVVEKEVFDDWGLLNKSFPHYDELSYMFGKDRAMGGRPKSFTDVGSNDLVRYEAFTADAASD
TNFQPMYSQGLSMSLDELMGTRTALVSEGKYISSGSKRKREG