CuGenDBv2

Gene ID	IVF0015671
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	copper ion binding;cobalt ion binding;zinc ion binding
Genome location	chr08:2940209..2943660
RNA-Seq Expression	IVF0015671
Synteny	IVF0015671
Gene Ontology terms	GO:0009555 - pollen development (biological process)
InterPro domains	IPR031432 - MALE GAMETOPHYTE DEFECTIVE 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004141966.1 probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis sativus]

4.10e-119

81.67

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAA PALKGD  +    LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMK+AREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDARSYLLAL+EIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKDDEMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

XP_008440128.1 PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial [Cucumis melo]

2.13e-121

83.33

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD  +    LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKDDEMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

XP_022132532.1 probable ATP synthase 24 kDa subunit, mitochondrial [Momordica charantia]

3.06e-114

77.92

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHA PVRHFAKEAARPALKGD  +    LEVKKKFETAL VF+KEKITIDPDDPAAVAQYAKVMK+AREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDAR+YLL L++IRIKRGL+D+LGAEA+MFDALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKD+EMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

XP_022977838.1 probable ATP synthase 24 kDa subunit, mitochondrial [Cucurbita maxima]

2.92e-112

77.08

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA SSRLLSKSKQVLGSQSILHQGHA PVRHFAKEAARPALKGD  +    LEVKKKFETA+ VF+KEKITIDPDDPAAVAQYAKVMKMAREKADLFSE+
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDAR+YLL L++IRIKR LSD+LGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKD+ M+DTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

XP_038881119.1 probable ATP synthase 24 kDa subunit, mitochondrial [Benincasa hispida]

4.55e-116

79.58

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA SSRLLSKSKQVLGSQSILHQGHA PVRHFAKEAARPALKGD  +    LEVKKKFETAL VF+KEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQT+TQDIPDARSYLLAL++IRIKRGLSDDLGAEAMMFDALEKVEKELKKPL+RNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKD+EMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKY9 Uncharacterized protein

1.8e-92

81.67

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAA PALKGD  +    LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMK+AREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDARSYLLAL+EIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKDDEMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

A0A1S3B0D0 probable ATP synthase 24 kDa subunit, mitochondrial

3.3e-94

83.33

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD  +    LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKDDEMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

A0A5D3CNN3 Putative ATP synthase 24 kDa subunit

3.3e-94

83.33

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD  +    LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKDDEMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

A0A6J1BU34 probable ATP synthase 24 kDa subunit, mitochondrial

9.4e-89

77.92

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MALSSRLLSKSKQVLGSQSILHQGHA PVRHFAKEAARPALKGD  +    LEVKKKFETAL VF+KEKITIDPDDPAAVAQYAKVMK+AREKADLFSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDAR+YLL L++IRIKRGL+D+LGAEA+MFDALEKVEKELKKPLLRNDKKGMS+LMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKD+EMVDTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

A0A6J1IR90 probable ATP synthase 24 kDa subunit, mitochondrial

3.0e-87

77.08

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA SSRLLSKSKQVLGSQSILHQGHA PVRHFAKEAARPALKGD  +    LEVKKKFETA+ VF+KEKITIDPDDPAAVAQYAKVMKMAREKADLFSE+
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHI----LEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS
        QRIKYTIQTRTQDIPDAR+YLL L++IRIKR LSD+LGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ       +LPKYEEQ  LK   
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQ-------NLPKYEEQWNLKFPS

Query:  --------------------EEFKDDEMVDTKSLDVRNFL
                            EEFKD+ M+DTKSLDVRNFL
Subjt:  --------------------EEFKDDEMVDTKSLDVRNFL

SwissProt top hits

e value

%identity

Alignment

Q9SJ12 Probable ATP synthase 24 kDa subunit, mitochondrial

2.8e-66

57.92

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA +SR LS+SKQ+ G   IL Q HA PVR FAKEAARP  KGD    G   ++K KF+ A+ + +KEKIT+DP+DPAAV QYA VMK  R+KAD+FSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNLKF--
        QRIK+ I T TQDIPDAR+YLL LQEIR +RGL+D+LGAEAMMF+ALEKVEK++KKPLLR+DKKGM +L+AEF+K N       ++LPKYEE   L    
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNLKF--

Query:  ------------------PSEEFKDDEMVDTKSLDVRNFL
                            EEF+D+EM D KSLD+RNF+
Subjt:  ------------------PSEEFKDDEMVDTKSLDVRNFL

Arabidopsis top hits

e value

%identity

Alignment

AT2G21870.1 copper ion binding;cobalt ion binding;zinc ion binding

2.0e-67

57.92

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA +SR LS+SKQ+ G   IL Q HA PVR FAKEAARP  KGD    G   ++K KF+ A+ + +KEKIT+DP+DPAAV QYA VMK  R+KAD+FSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNLKF--
        QRIK+ I T TQDIPDAR+YLL LQEIR +RGL+D+LGAEAMMF+ALEKVEK++KKPLLR+DKKGM +L+AEF+K N       ++LPKYEE   L    
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNLKF--

Query:  ------------------PSEEFKDDEMVDTKSLDVRNFL
                            EEF+D+EM D KSLD+RNF+
Subjt:  ------------------PSEEFKDDEMVDTKSLDVRNFL

AT2G21870.2 copper ion binding;cobalt ion binding;zinc ion binding

3.3e-62

61.72

Show/hide

Query:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES
        MA +SR LS+SKQ+ G   IL Q HA PVR FAKEAARP  KGD    G   ++K KF+ A+ + +KEKIT+DP+DPAAV QYA VMK  R+KAD+FSES
Subjt:  MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGD----GHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSES

Query:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNL---K
        QRIK+ I T TQDIPDAR+YLL LQEIR +RGL+D+LGAEAMMF+ALEKVEK++KKPLLR+DKKGM +L+AEF+K N       ++LPKYEE   L   K
Subjt:  QRIKYTIQTRTQDIPDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKIN-------QNLPKYEEQWNL---K

Query:  FPSEEFKDD
           +E K D
Subjt:  FPSEEFKDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTCTCTCATCTCGTCTCTTGTCCAAATCCAAGCAGGTGCTTGGCAGTCAAAGTATTTTACACCAGGGGCATGCTTTTCCTGTTCGTCATTTTGCAAAAGAGGCTGC
TCGGCCTGCTCTCAAGGGAGATGGACATATTTTGGAAGTGAAAAAGAAGTTTGAGACAGCATTGGCTGTTTTCAAGAAAGAGAAGATCACAATTGATCCGGATGATCCTG
CTGCTGTGGCTCAATACGCTAAGGTCATGAAAATGGCGAGAGAGAAGGCAGATCTATTCTCAGAATCACAGCGAATTAAATACACAATTCAGACAAGAACCCAAGACATC
CCTGATGCCAGATCATACTTGCTGGCACTGCAGGAGATCCGGATTAAGAGAGGTCTCAGTGATGACCTTGGTGCAGAAGCTATGATGTTTGATGCTCTGGAGAAGGTTGA
GAAAGAATTAAAGAAACCTCTCTTGAGGAATGATAAAAAAGGAATGTCTATTCTCATGGCCGAGTTTGACAAAATCAATCAAAATCTGCCCAAGTATGAGGAGCAGTGGA
ACTTAAAATTTCCAAGTGAGGAGTTTAAAGACGACGAGATGGTGGATACGAAGTCGCTAGACGTGAGAAACTTCCTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAARPALKGDGHILEVKKKFETALAVFKKEKITIDPDDPAAVAQYAKVMKMAREKADLFSESQRIKYTIQTRTQDI
PDARSYLLALQEIRIKRGLSDDLGAEAMMFDALEKVEKELKKPLLRNDKKGMSILMAEFDKINQNLPKYEEQWNLKFPSEEFKDDEMVDTKSLDVRNFL

IVF0015671 (gene) of Melon (IVF77) v1 genome