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IVF0015702 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015702
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag/pol protein
Genome locationchr07:5004997..5005317
RNA-Seq ExpressionIVF0015702
SyntenyIVF0015702
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0016787 - hydrolase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047411.1 gag/pol protein [Cucumis melo var. makuwa]4.15e-2055.67Show/hide
Query:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVSETT
        MR RMP TQF   GVK+ P TVS    VLVI  S F     RTS++  G++   F Q I  + SS+EGELRC PK SKRWPML QRV N  +VSETT
Subjt:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVSETT

KAA0059489.1 ribosomal protein L5 [Cucumis melo var. makuwa]1.58e-2967.39Show/hide
Query:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETT
        MPRTQFS P VKSG PTVSSL  V VI++SIF ARA  TS+HT GML  TFSQGIG E SS+EG+L C+PK SKRWPML   A P   S TT
Subjt:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETT

KAA0061317.1 hypothetical protein E6C27_scaffold6213G00130 [Cucumis melo var. makuwa]3.86e-2063.29Show/hide
Query:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML
        MPRTQFSR   K  P        VLVI++SIF AR LRTS HTSGML   F+QGIG E SS+EGEL  DPK  KRWPML
Subjt:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]8.94e-2862.75Show/hide
Query:  RERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETTGNASA
        R RMPR+QFSR G KS  PTVSSL FVLVIN+SIF AR  RTS HT+GML D FS+GIG E SS+EGEL C+PK SKRW ML     P  V  ++G  + 
Subjt:  RERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETTGNASA

Query:  LK
        LK
Subjt:  LK

TYK15439.1 uncharacterized protein E5676_scaffold477G00010 [Cucumis melo var. makuwa]5.33e-2068.12Show/hide
Query:  VKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML
        VKSGPPTVSS+  VLVI +SIF A   RTS HT GML D FS GI  E  S+EGEL CDPK S+RWPML
Subjt:  VKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML

TrEMBL top hitse value%identityAlignment
A0A5A7V129 Ribosomal protein L5 (Mitochondrion)2.9e-2267.39Show/hide
Query:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETT
        MPRTQFS P VKSG PTVSSL  V VI++SIF ARA  TS+HT GML  TFSQGIG E SS+EG+L C+PK SKRWPML   A P   S TT
Subjt:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETT

A0A5A7V368 Uncharacterized protein2.0e-1563.29Show/hide
Query:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML
        MPRTQFSR   K  P        VLVI++SIF AR LRTS HTSGML   F+QGIG E SS+EGEL  DPK  KRWPML
Subjt:  MPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein5.9e-2362.75Show/hide
Query:  RERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETTGNASA
        R RMPR+QFSR G KS  PTVSSL FVLVIN+SIF AR  RTS HT+GML D FS+GIG E SS+EGEL C+PK SKRW ML     P  V  ++G  + 
Subjt:  RERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETTGNASA

Query:  LK
        LK
Subjt:  LK

A0A5A7VEB1 Retrotransposon protein, putative, Ty3-gypsy subclass, expressed4.1e-1656.38Show/hide
Query:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVS
        +R RMP TQF   GVK+GP  VS    VLVI+ S F    LRTS++  G++R +FSQ IG E SS +GE RC+PK SK WP+L QRVAN R VS
Subjt:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVS

A0A5D3CUK8 Gag/pol protein1.8e-1655.67Show/hide
Query:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVSETT
        MR RMP TQF   GVK+ P TVS    VLVI  S F     RTS++  G++   F Q I  + SS+EGELRC PK SKRWPML QRV N  +VSETT
Subjt:  MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPML-QRVANPRMVSETT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAGAGAATGCCCCGCACTCAGTTTTCTCGTCCTGGGGTAAAAAGTGGTCCCCCAACGGTTTCTTCCCTTTGGTTCGTATTGGTCATAAATATTTCGATCTTCGT
GGCTCGTGCTTTGAGGACTTCAATCCACACTTCTGGCATGCTCCGTGACACATTTTCCCAAGGTATTGGTCCGGAACCGAGCTCGGTGGAGGGAGAACTAAGATGCGATC
CAAAATTGTCCAAAAGATGGCCAATGCTTCAACGAGTGGCGAATCCTCGTATGGTGTCAGAAACAACTGGAAATGCATCTGCCTTGAAAAAAATGGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAGAGAATGCCCCGCACTCAGTTTTCTCGTCCTGGGGTAAAAAGTGGTCCCCCAACGGTTTCTTCCCTTTGGTTCGTATTGGTCATAAATATTTCGATCTTCGT
GGCTCGTGCTTTGAGGACTTCAATCCACACTTCTGGCATGCTCCGTGACACATTTTCCCAAGGTATTGGTCCGGAACCGAGCTCGGTGGAGGGAGAACTAAGATGCGATC
CAAAATTGTCCAAAAGATGGCCAATGCTTCAACGAGTGGCGAATCCTCGTATGGTGTCAGAAACAACTGGAAATGCATCTGCCTTGAAAAAAATGGGCTGA
Protein sequenceShow/hide protein sequence
MRERMPRTQFSRPGVKSGPPTVSSLWFVLVINISIFVARALRTSIHTSGMLRDTFSQGIGPEPSSVEGELRCDPKLSKRWPMLQRVANPRMVSETTGNASALKKMG