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IVF0015704 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015704
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUbiquitin family protein
Genome locationchr06:20959628..20959855
RNA-Seq ExpressionIVF0015704
SyntenyIVF0015704
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019954 - Ubiquitin conserved site
IPR019956 - Ubiquitin domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACH45552.1 putative ubiquitin C variant 1 [Taeniopygia guttata]3.63e-2053.33Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  SLEVEPTDTI +VK +++A   +P D QRL+F GK LED + L  YNI+K+S L+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
KAA0025488.1 putative ubiquitin C variant 1 [Cucumis melo var. makuwa]4.87e-47100Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
XP_003935153.1 ubiquitin-like [Saimiri boliviensis boliviensis]1.04e-1952Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STLYL+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
XP_015268431.1 PREDICTED: ubiquitin [Gekko japonicus]2.10e-1950.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T +G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
XP_025845329.1 ubiquitin-like [Vulpes vulpes]7.32e-2053.33Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  SLEVEP+DTI +VK +++    +P D QRL+F GK LED   L  YNI+K+STLYL+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
TrEMBL top hitse value%identityAlignment
A0A0A0L550 Ubiquitin-like domain-containing protein1.1e-2071.62Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        MFVRTF GE F+LE+EPT TI DVKDQ+E LN V S SQRL+FG KT+ED K LEHY I+ DSTLYLIFR +GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
A0A3Q7RHY6 ubiquitin-like2.7e-1453.33Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  SLEVEP+DTI +VK +++    +P D QRL+F GK LED   L  YNI+K+STLYL+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
A0A484MAB3 Ubiquitin-like domain-containing protein2.7e-1456.16Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYG
        +FV+T  G++F+LEVE +DTIAD+K+Q+E L  VP+D QRL+F GK LED + +  YNIEK+STL+L  R+ G
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYG
A0A5D3BMG6 Putative ubiquitin C variant 16.2e-35100Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
B5G2P1 Putative ubiquitin C variant 11.6e-1453.33Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  SLEVEPTDTI +VK +++A   +P D QRL+F GK LED + L  YNI+K+S L+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
SwissProt top hitse value%identityAlignment
P0CG47 Polyubiquitin-B2.8e-1650.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
P0CG53 Polyubiquitin-B2.8e-1650.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
P0CG65 Polyubiquitin-B2.8e-1650.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
P0CG67 Polyubiquitin-B2.8e-1650.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
Q8MKD1 Polyubiquitin-B2.8e-1650.67Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
        +FV+T  G+  +LEVEP+DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GGC
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC
Arabidopsis top hitse value%identityAlignment
AT1G23410.1 Ribosomal protein S27a / Ubiquitin family protein3.2e-1548.65Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        +FV+T  G+  +LEVE +DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
AT1G31340.1 related to ubiquitin 13.2e-1548.65Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        +FV+T  G+  +LEVE +DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
AT1G65350.1 ubiquitin 133.2e-1548.65Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        +FV+T  G+  +LEVE +DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
AT2G35635.1 ubiquitin 73.2e-1548.65Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        +FV+T  G+  +LEVE +DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
AT2G47110.1 ubiquitin 63.2e-1548.65Show/hide
Query:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG
        +FV+T  G+  +LEVE +DTI +VK +++    +P D QRL+F GK LED + L  YNI+K+STL+L+ R+ GG
Subjt:  MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGTGAGGACGTTTGACGGGGAGAAATTTAGTTTAGAAGTCGAACCAACGGATACGATCGCGGATGTGAAGGATCAAATGGAAGCTCTTAACGAAGTACCCTCTGA
TTCTCAAAGGCTACTTTTTGGTGGCAAGACTCTTGAAGATCATAAGGCTCTTGAACATTATAATATTGAGAAAGATTCTACACTGTATTTGATTTTTCGTGTTTATGGCG
GCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGTGAGGACGTTTGACGGGGAGAAATTTAGTTTAGAAGTCGAACCAACGGATACGATCGCGGATGTGAAGGATCAAATGGAAGCTCTTAACGAAGTACCCTCTGA
TTCTCAAAGGCTACTTTTTGGTGGCAAGACTCTTGAAGATCATAAGGCTCTTGAACATTATAATATTGAGAAAGATTCTACACTGTATTTGATTTTTCGTGTTTATGGCG
GCTGTTGA
Protein sequenceShow/hide protein sequence
MFVRTFDGEKFSLEVEPTDTIADVKDQMEALNEVPSDSQRLLFGGKTLEDHKALEHYNIEKDSTLYLIFRVYGGC