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IVF0015731 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015731
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposable element Tf2
Genome locationchr06:14799026..14799286
RNA-Seq ExpressionIVF0015731
SyntenyIVF0015731
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032923.1 polyprotein [Cucumis melo var. makuwa]2.03e-1961.18Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDEA LLTKNAVMS+LAG  +Q+EFN VVN V V +SD +D   E  SP S+N+V    D+ D++ YV  DINDPFLD+QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
KAA0054115.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]1.71e-1960Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDEA LLTKNAVMS+LAG   Q+EFN VVN V V +SD +D   E  SP S+N+V    D+ D++ Y   DINDPFLD+QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
KAA0060292.1 hypothetical protein E6C27_scaffold22G00670 [Cucumis melo var. makuwa]1.15e-50100Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
        MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
KAA0066358.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.72e-2061.18Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDEA LLTKNAVMS+LAG  +Q+EFN VVN V V +SD +D   E  SP S+N+V    D+ D+N Y   DINDPFLD QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
TYK19825.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa]4.30e-2373.53Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDF
        +TR+EDEA LLTKN +MSSL   G QEEFN VVNTVAVQIS+PDD QAE NSP S+NNVIE++D+DDF
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDF
TrEMBL top hitse value%identityAlignment
A0A5A7SR64 Polyprotein1.3e-1561.18Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDEA LLTKNAVMS+LAG  +Q+EFN VVN V V +SD +D   E  SP S+N+V    D+ D++ YV  DINDPFLD+QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
A0A5A7U7T9 Polyprotein2.2e-1560Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDE  LLTKNAVMS+LAG  +Q+EFNFVVN V V +SD +D   E  SP S+N+V    D+ D++ Y   DINDPFLD+QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
A0A5A7UVN1 Retrotransposable element Tf21.7e-1561.18Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
        MTRQEDEA LLTKNAVMS+LAG  +Q+EFN VVN V V +SD +D   E  SP S+NNV    D+ D++ Y   DINDPFLD+QP
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQP
A0A5A7UWR6 Uncharacterized protein1.5e-37100Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
        MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM
A0A5D3D8C1 Retrotransposable element Tf22.3e-1772.46Show/hide
Query:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFN
        +TR+EDEA LLTKN +MSSL   G QEEFN VVNTVAVQIS+PDD QAE NSP S+NNVIE++D+DDF+
Subjt:  MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTCAAGAAGACGAAGCATCCCTCCTCACCAAGAATGCCGTTATGTCGTCTCTCGCCGGAGTAGGATCCCAAGAAGAATTCAACTTCGTGGTCAATACAGTTGC
TGTTCAAATTTCTGACCCAGACGACCTCCAGGCAGAAGCTAATTCTCCAATCTCAATCAACAACGTCATAGAAGAAGATGACGAAGATGACTTCAATTCATATGTGGATT
ACGACATCAATGACCCATTTTTAGATTCACAACCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGTCAAGAAGACGAAGCATCCCTCCTCACCAAGAATGCCGTTATGTCGTCTCTCGCCGGAGTAGGATCCCAAGAAGAATTCAACTTCGTGGTCAATACAGTTGC
TGTTCAAATTTCTGACCCAGACGACCTCCAGGCAGAAGCTAATTCTCCAATCTCAATCAACAACGTCATAGAAGAAGATGACGAAGATGACTTCAATTCATATGTGGATT
ACGACATCAATGACCCATTTTTAGATTCACAACCTATGTGA
Protein sequenceShow/hide protein sequence
MTRQEDEASLLTKNAVMSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDINDPFLDSQPM