; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0015800 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015800
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA-directed RNA polymerase III subunit rpc6-like
Genome locationchr06:23811974..23813604
RNA-Seq ExpressionIVF0015800
SyntenyIVF0015800
Gene Ontology termsGO:0006383 - transcription by RNA polymerase III (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsIPR007832 - RNA polymerase Rpc34
IPR016049 - RNA polymerase Rpc34-like
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13079.1 DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo var. makuwa]1.69e-16696.71Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

TYK19400.1 DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo var. makuwa]1.26e-176100Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_004148278.1 DNA-directed RNA polymerase III subunit RPC6 [Cucumis sativus]1.05e-17498.77Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_008439941.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC6-like [Cucumis melo]2.56e-16896.71Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

XP_008448982.1 PREDICTED: DNA-directed RNA polymerase III subunit rpc6-like [Cucumis melo]1.09e-176100Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

TrEMBL top hitse value%identityAlignment
A0A0A0L5W6 Uncharacterized protein1.7e-13498.77Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        M KS+GPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A1S3BL06 DNA-directed RNA polymerase III subunit rpc6-like5.3e-136100Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A5A7UBI4 DNA-directed RNA polymerase III subunit RPC6-like1.3e-12996.71Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A5D3CS47 DNA-directed RNA polymerase III subunit RPC6-like1.3e-12996.71Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDL TKNSS GALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVEL+REQIEEIVNALVLDNQV EVKSSGFGEFEFIPIGKICYKYC+Q GGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPK GAMASIPCGVCPRIT+CTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

A0A5D3D7H7 DNA-directed RNA polymerase III subunit rpc6-like5.3e-136100Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
        TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGL

Query:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
        KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
Subjt:  KGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF

SwissProt top hitse value%identityAlignment
O94553 Probable DNA-directed RNA polymerase III subunit rpc61.6e-2029.06Show/hide
Query:  GQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQ
        G E+++Y  I +  + GI    +   T    SVV + LKSL++K L+K ++  +N  +K Y+  D  P+ ELTGG W+ D ELD ++I  LK+V  R + 
Subjt:  GQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQ

Query:  RKKL--------------------MTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGA
         K                       T   I    + +   KV+LS   +  +V+ L+ D +V E +S G   +  I +                   I A
Subjt:  RKKL--------------------MTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGA

Query:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLD
            PCG CP    C  N  ++P TC Y  KWL+
Subjt:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLD

Q2T9S3 DNA-directed RNA polymerase III subunit RPC62.2e-2230.6Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+  +        P  G +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Q86JM3 DNA-directed RNA polymerase III subunit rpc61.4e-2127.46Show/hide
Query:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL
        +  S   +S K   P+   K    G    ++ ++Y LI +  + G  T ++K  + + +  +TK LK+L+++ LIK V+  Q+  KK Y+  + EP++E+
Subjt:  MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKEL

Query:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG
        TGG  Y D   D  YI  +K      +  K  + +  I+   ++    A    L  E I+ +VN ++ D  + E++ +  G       G I YK      
Subjt:  TGGNWYRDGELDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQ--SGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGG

Query:  GLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD
          K    +    ++PCG CP    C+ NG++SP  CVY+ ++L+
Subjt:  GLKGEPKIGAMASIPCGVCPRITYCTPNGIISPATCVYYTKWLD

Q921X6 DNA-directed RNA polymerase III subunit RPC61.7e-2230.6Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS
        K     E     +++   SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P  G + +
Subjt:  KKLMTIEG----IVE---SFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Q9H1D9 DNA-directed RNA polymerase III subunit RPC63.8e-2230.6Show/hide
Query:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR
        QEK++Y +I    + GI + D++ ++    + + K LK+L++K LIK V+      KK Y+  + +P + +TGG WY D + + +++  L Q C + +Q 
Subjt:  QEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGELDKDYINTLKQVCARMIQR

Query:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS
        K     E           SF  S          G  KVELS E IE I+N L+ D +V M + ++  G    +      Y+           P  G +  
Subjt:  KKLMTIEGIV-------ESFKQS----------GAFKVELSREQIEEIVNALVLDNQV-MEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMAS

Query:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         PCG+CP    C   G ISP+ C+Y T+WL+F
Subjt:  IPCGVCPRITYCTPNGIISPATCVYYTKWLDF

Arabidopsis top hitse value%identityAlignment
AT5G23710.1 DNA binding;DNA-directed RNA polymerases1.6e-5246.81Show/hide
Query:  KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
        KRKRPD   K+S G      EK L DLI   Q  G   F++KRE     ++VT+ + SL+ K LIK V +  NKG K YL+ +FEP  ELTGG WY DG 
Subjt:  KRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE

Query:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGA
        LD   I  LK  C  +++  R++++T+E +   F +    + +LS +Q +EI+  L+LDN +MEVKS+G  EF    IG++CY+   +  G  GEP+ GA
Subjt:  LDKDYINTLKQVCARMIQ--RKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGA

Query:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF
         ASIPCGVCP I  C+P+G+ISP TCVY+ KWLDF
Subjt:  MASIPCGVCPRITYCTPNGIISPATCVYYTKWLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAAATCACAAGGGCCATCATCCCTCAAGAGAAAAAGGCCAGATTTGGGTACGAAAAATTCCTCTGGAGGAGCTCTAATTGGGCAAGAAAAAGTTCTTTATGACCT
AATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGATATGAAAAGAGAGACAAAGTTTGCTGAAAGTGTAGTAACAAAATCCCTCAAGTCTCTTCAAACCAAGGGCC
TGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAATTCTACCTATCAAACGACTTCGAACCGGCTAAGGAATTAACCGGCGGTAACTGGTATCGTGATGGGGAG
CTTGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGATGACCATTGAAGGAATTGTGGAGTCTTTCAAACAGAGTGGGGC
TTTCAAAGTAGAGTTGTCAAGAGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAAGTGATGGAAGTGAAGAGCTCTGGATTTGGTGAATTTGAATTCA
TTCCAATTGGGAAGATTTGTTATAAGTATTGTACTCAAGGAGGAGGCCTCAAAGGGGAGCCTAAAATAGGAGCAATGGCTTCCATTCCATGTGGAGTTTGTCCAAGGATC
ACTTATTGTACCCCAAATGGCATCATTTCTCCTGCCACCTGTGTCTATTATACCAAGTGGTTAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
CGAATATTATTTGGGTTAAACCAAACCCAACCATCCGACCAACCCAAATTTAGGGTTCGAATTCGTAAAAATTCGAAAAATTTAGTGCCAGATTTGAGTTTTGATCCCCT
CCAAAACCTAATTCTTTTGTAAGACCTCCGCCTTCTTCTTTTTCCTACGATCTTCTTCCTTATCCTCATTTATTCTTCACCGGCGACGGCAACGGGTCCTTCCCACCAGC
CGGATTCTGACGATTGAACGGTACAAATTACATTTTTATTAAGATGGTTTAGATGCGTTTTGATCCTCGAGACACTATGTTGTTGGAGCTTCTCGAAACACCATGGTTGT
TGGAGCTTCAAACGATTAAAGAGTAACAGGGAATGAGTAAATCACAAGGGCCATCATCCCTCAAGAGAAAAAGGCCAGATTTGGGTACGAAAAATTCCTCTGGAGGAGCT
CTAATTGGGCAAGAAAAAGTTCTTTATGACCTAATTTGCAGCAAGCAAAGCATGGGGATTTGCACTTTTGATATGAAAAGAGAGACAAAGTTTGCTGAAAGTGTAGTAAC
AAAATCCCTCAAGTCTCTTCAAACCAAGGGCCTGATAAAGATAGTCCAACACTATCAAAACAAAGGCAAGAAATTCTACCTATCAAACGACTTCGAACCGGCTAAGGAAT
TAACCGGCGGTAACTGGTATCGTGATGGGGAGCTTGACAAAGACTACATCAATACTCTCAAACAAGTTTGTGCAAGAATGATACAAAGGAAGAAGTTGATGACCATTGAA
GGAATTGTGGAGTCTTTCAAACAGAGTGGGGCTTTCAAAGTAGAGTTGTCAAGAGAGCAAATTGAAGAGATTGTAAATGCTTTGGTGTTGGACAATCAAGTGATGGAAGT
GAAGAGCTCTGGATTTGGTGAATTTGAATTCATTCCAATTGGGAAGATTTGTTATAAGTATTGTACTCAAGGAGGAGGCCTCAAAGGGGAGCCTAAAATAGGAGCAATGG
CTTCCATTCCATGTGGAGTTTGTCCAAGGATCACTTATTGTACCCCAAATGGCATCATTTCTCCTGCCACCTGTGTCTATTATACCAAGTGGTTAGATTTTTAAGTTTAA
ACATTTTGAAGATATATACACATAATGTGCATATGTATTTAAACTTCTCCAAGTTGGTGTTTTTTTCCTATTAATCTATTAGTCCTTCAAGTTTCAA
Protein sequenceShow/hide protein sequence
MSKSQGPSSLKRKRPDLGTKNSSGGALIGQEKVLYDLICSKQSMGICTFDMKRETKFAESVVTKSLKSLQTKGLIKIVQHYQNKGKKFYLSNDFEPAKELTGGNWYRDGE
LDKDYINTLKQVCARMIQRKKLMTIEGIVESFKQSGAFKVELSREQIEEIVNALVLDNQVMEVKSSGFGEFEFIPIGKICYKYCTQGGGLKGEPKIGAMASIPCGVCPRI
TYCTPNGIISPATCVYYTKWLDF