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IVF0015803 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015803
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr08:8585428..8585836
RNA-Seq ExpressionIVF0015803
SyntenyIVF0015803
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]3.96e-5396.94Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS
        MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSI IGSPTESSTPPRPS NLIRPSGGVIQMRPPASPSSNRE S
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS

KAA0032003.1 hypothetical protein E6C27_scaffold134G001000 [Cucumis melo var. makuwa]1.85e-5376.47Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNR-----
        MSSEKGSARGRTN TSSKG+R  SSSNS PSPMSA QYTMDLGFT VTRSRSR   IRIGSPTESSTPPRPS NLIRPSGGV+QMRP  SP  +      
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNR-----

Query:  -------ELSPSINGLCQDPRSNLIFKSLSLFMILS
                LSP INGLCQDPRSNLIFKSLSLFMILS
Subjt:  -------ELSPSINGLCQDPRSNLIFKSLSLFMILS

KAA0032939.1 hypothetical protein E6C27_scaffold269G00120 [Cucumis melo var. makuwa]1.52e-4572.39Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS--
        MSS+K SAR RTNSTSSK + PSSSSNS PSPMSA QY MDL FTIVTRSRSR   IRIGSPTESSTPPRPSANLIRPSG V+QMRPPASP SNRE S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS--

Query:  PSINGLCQDP--------RSNLIFKSLSLFMILS
        P+       P        +SNLIFKSLSLF+ILS
Subjt:  PSINGLCQDP--------RSNLIFKSLSLFMILS

KAA0038837.1 hypothetical protein E6C27_scaffold2487G00030 [Cucumis melo var. makuwa]1.42e-4681.48Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS
        MSSEKGSARGRTNSTSSKG+RPSSSSN  PSPMSAYQY MDLGFT VTRSRSR SSIRIGSPTESSTPPRPSANLIRPS GV+QMRP AS SSN+E S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS

Query:  INGLCQDP
             Q+P
Subjt:  INGLCQDP

KAA0045303.1 hypothetical protein E6C27_scaffold316G00680 [Cucumis melo var. makuwa]3.07e-4570.15Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS
        MSSEKGSARGRTNSTSSKG+ PSSSSN   SP++A QY MDLGFT VTRSRSR S IRIGS TESSTPPRPS NLI PSGGV+QMRP ASPSSN+E S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS

Query:  INGLCQ----------DPRSNLIFKSLSLFMILS
             Q           P SNLIFKSLS F+ILS
Subjt:  INGLCQ----------DPRSNLIFKSLSLFMILS

TrEMBL top hitse value%identityAlignment
A0A5A7TB73 Uncharacterized protein3.0e-3481.48Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS
        MSSEKGSARGRTNSTSSKG+RPSSSSN  PSPMSAYQY MDLGFT VTRSRSR SSIRIGSPTESSTPPRPSANLIRPS GV+QMRP AS SSN+E S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS

Query:  INGLCQDP
             Q+P
Subjt:  INGLCQDP

A0A5A7TP36 Uncharacterized protein2.5e-3370.15Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS
        MSSEKGSARGRTNSTSSKG+ PSSSSN   SP++A QY MDLGFT VTRSRSR S IRIGS TESSTPPRPS NLI PSGGV+QMRP ASPSSN+E S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPS

Query:  INGLCQ----------DPRSNLIFKSLSLFMILS
             Q           P SNLIFKSLS F+ILS
Subjt:  INGLCQ----------DPRSNLIFKSLSLFMILS

A0A5D3D0R2 Uncharacterized protein1.4e-3976.47Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSN------
        MSSEKGSARGRTN TSSKG+R  SSSNS PSPMSA QYTMDLGFT VTRSRSR   IRIGSPTESSTPPRPS NLIRPSGGV+QMRP  SP  +      
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSN------

Query:  ------RELSPSINGLCQDPRSNLIFKSLSLFMILS
                LSP INGLCQDPRSNLIFKSLSLFMILS
Subjt:  ------RELSPSINGLCQDPRSNLIFKSLSLFMILS

A0A5D3DEK9 Uncharacterized protein1.5e-3372.39Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS--
        MSS+K SAR RTNSTSSK + PSSSSNS PSPMSA QY MDL FTIVTRSRSR   IRIGSPTESSTPPRPSANLIRPSG V+QMRPPASP SNRE S  
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS--

Query:  PSINGLCQDP--------RSNLIFKSLSLFMILS
        P+       P        +SNLIFKSLSLF+ILS
Subjt:  PSINGLCQDP--------RSNLIFKSLSLFMILS

E5GCE6 Uncharacterized protein8.1e-4096.94Show/hide
Query:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS
        MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSI IGSPTESSTPPRPS NLIRPSGGVIQMRPPASPSSNRE S
Subjt:  MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGGAAAAGGGAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCCATCGCCCATCTTCTTCTTCTAATTCTGAACCCTCACCTATGAGTGCATATCA
ATATACAATGGATTTAGGGTTTACCATAGTAACCCGATCCAGATCAAGATTGTCCAGCATACGGATTGGGTCCCCCACGGAGTCATCAACTCCACCTAGGCCTTCGGCCA
ATCTTATCCGTCCTTCTGGCGGAGTCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAGCTGTCACCCTCGATAAACGGTTTGTGCCAAGACCCGAGATCA
AATCTTATTTTCAAAAGTCTATCGTTGTTTATGATCCTATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCGGAAAAGGGAAGTGCTAGAGGAAGAACAAACTCTACCTCTTCAAAGGGCCATCGCCCATCTTCTTCTTCTAATTCTGAACCCTCACCTATGAGTGCATATCA
ATATACAATGGATTTAGGGTTTACCATAGTAACCCGATCCAGATCAAGATTGTCCAGCATACGGATTGGGTCCCCCACGGAGTCATCAACTCCACCTAGGCCTTCGGCCA
ATCTTATCCGTCCTTCTGGCGGAGTCATTCAAATGAGGCCTCCTGCCTCTCCTTCATCCAATAGGGAGCTGTCACCCTCGATAAACGGTTTGTGCCAAGACCCGAGATCA
AATCTTATTTTCAAAAGTCTATCGTTGTTTATGATCCTATCATAG
Protein sequenceShow/hide protein sequence
MSSEKGSARGRTNSTSSKGHRPSSSSNSEPSPMSAYQYTMDLGFTIVTRSRSRLSSIRIGSPTESSTPPRPSANLIRPSGGVIQMRPPASPSSNRELSPSINGLCQDPRS
NLIFKSLSLFMILS