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IVF0015810 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015810
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr02:11152333..11152667
RNA-Seq ExpressionIVF0015810
SyntenyIVF0015810
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035161.1 retrotransposon protein [Cucumis melo var. makuwa]8.91e-5296.39Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL  KQYTAIAEMMGPACSGFGWNE+RKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]3.17e-4271.17Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ----------------------------KQYTAIAEMMGPACSGFGWNEERK
        MASTNSKATKHRWTTI DE LVECLLQLVEE GWRADNGTFKLGYLVQ                            KQY AIAEMMGPACSGFGWNEERK
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ----------------------------KQYTAIAEMMGPACSGFGWNEERK

Query:  CIEAEKSVFDD
        CIEAEKSVFDD
Subjt:  CIEAEKSVFDD

TYK06362.1 retrotransposon protein [Cucumis melo var. makuwa]3.00e-4492.77Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDE LV CLLQLVEE GWRADNGTFK GYL  KQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]9.43e-4490.36Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFKLGYL  KQYTAIAEMMGPACSGFGWNE +KCIE EK VFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

XP_008462939.1 PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]1.58e-4591.57Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MAST SKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFK GYL  KQYTAIAEMMG ACSGFGWNEERKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

TrEMBL top hitse value%identityAlignment
A0A1S3CI24 uncharacterized protein At2g29880-like4.0e-3591.57Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MAST SKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFK GYL  KQYTAIAEMMG ACSGFGWNEERKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

A0A5A7T0P1 Retrotransposon protein3.5e-3996.39Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYL  KQYTAIAEMMGPACSGFGWNE+RKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

A0A5A7U7F7 Retrotransposon protein3.8e-3371.17Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ----------------------------KQYTAIAEMMGPACSGFGWNEERK
        MASTNSKATKHRWTTI DE LVECLLQLVEE GWRADNGTFKLGYLVQ                            KQY AIAEMMGPACSGFGWNEERK
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQ----------------------------KQYTAIAEMMGPACSGFGWNEERK

Query:  CIEAEKSVFDD
        CIEAEKSVFDD
Subjt:  CIEAEKSVFDD

A0A5D3C542 Retrotransposon protein3.6e-3692.77Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDE LV CLLQLVEE GWRADNGTFK GYL  KQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

A0A5D3C7T4 Uncharacterized protein1.8e-3590.36Show/hide
Query:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD
        MASTNSKATKHRWTTIEDE LVECLLQLVEE GWRADNGTFKLGYL  KQYTAIAEMMGPACSGFGWNE +KCIE EK VFDD
Subjt:  MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGA
TAATGGAACATTCAAACTGGGATATTTGGTACAAAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCA
TTGAGGCAGAGAAATCCGTGTTCGATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATCGACAAATTCAAAAGCCACTAAGCATCGGTGGACAACCATTGAGGATGAGGCGTTAGTTGAGTGCTTACTACAACTAGTAGAGGAATGTGGCTGGAGGGCTGA
TAATGGAACATTCAAACTGGGATATTTGGTACAAAAGCAGTACACTGCCATAGCAGAGATGATGGGGCCAGCTTGTAGTGGGTTTGGCTGGAATGAGGAACGAAAGTGCA
TTGAGGCAGAGAAATCCGTGTTCGATGATTAG
Protein sequenceShow/hide protein sequence
MASTNSKATKHRWTTIEDEALVECLLQLVEECGWRADNGTFKLGYLVQKQYTAIAEMMGPACSGFGWNEERKCIEAEKSVFDD