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IVF0015812 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015812
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr11:8185914..8186120
RNA-Seq ExpressionIVF0015812
SyntenyIVF0015812
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0035196 - production of miRNAs involved in gene silencing by miRNA (biological process)
GO:1903730 - regulation of phosphatidate phosphatase activity (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033551.1 retrotransposon protein [Cucumis melo var. makuwa]9.56e-1776.27Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        EDAMAAQVIEL+EAI NLTMAEKSK +M+VNQKVSLMRSFIKM D MK  Y R++LG +
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

KAA0038274.1 retrotransposon protein [Cucumis melo var. makuwa]1.60e-1776.27Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        EDAMAAQVIEL+EAI NLTMAEKS  +++VNQKVSLMRSFIKM D MK AY R++LG D
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]3.61e-1981.36Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        ED MAAQVIEL++AISNLTMAEKSK +M+VNQKVSLMRSFIKM DLMK AY RV+LG D
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

TYJ98397.1 retrotransposon protein [Cucumis melo var. makuwa]1.86e-33100Show/hide
Query:  DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW
        DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW
Subjt:  DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW

TYK19822.1 retrotransposon protein [Cucumis melo var. makuwa]1.50e-1475.93Show/hide
Query:  AQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        AQVIEL+E I NLTMAEKSK I++VNQKVSLMRSFIKM D MKVAY R++ G D
Subjt:  AQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

TrEMBL top hitse value%identityAlignment
A0A5A7T479 Retrotransposon protein4.6e-1376.27Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        EDAMAAQVIEL+EAI NLTMAEKS  +++VNQKVSLMRSFIKM D MK AY R++LG D
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

A0A5A7TYU4 Retrotransposon protein1.9e-1481.36Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        ED MAAQVIEL++AISNLTMAEKSK +M+VNQKVSLMRSFIKM DLMK AY RV+LG D
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

A0A5D3B9T0 Retrotransposon protein1.0e-1276.27Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        EDAMAAQVIEL+EAI NLTMAEKSK +M+VNQKVSLMRSFIKM D MK  Y R++LG +
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

A0A5D3BGZ9 Retrotransposon protein5.3e-25100Show/hide
Query:  DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW
        DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW
Subjt:  DSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW

A0A5D3DYD1 Retrotransposon protein1.3e-1071.19Show/hide
Query:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD
        EDAM AQVIE M++I +LTMAEKSK ++IV +KVSLMR+FIKM D MKVAY RV+LG D
Subjt:  EDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGAT
AGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAGATAGCTGTGAGCTGGAGGACGCGATGGCGGCGCAGGTGATTGAGCTTATGGAGGCCATCTCGAACCTTACTATGGCGGAGAAGAGTAAGGGCATCATGAT
AGTGAATCAGAAGGTGTCACTCATGAGAAGCTTCATCAAGATGTTCGATTTGATGAAGGTCGCTTACTATAGGGTCATCCTTGGCAGTGACTGGTGA
Protein sequenceShow/hide protein sequence
MAADSCELEDAMAAQVIELMEAISNLTMAEKSKGIMIVNQKVSLMRSFIKMFDLMKVAYYRVILGSDW