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IVF0015836 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015836
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like
Genome locationchr01:16992934..16994639
RNA-Seq ExpressionIVF0015836
SyntenyIVF0015836
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008447032.1 PREDICTED: protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucumis melo]3.17e-53100Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_011659076.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucumis sativus]1.57e-4491.4Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSS-RSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAA SRSM GRT+ LAHKTLNPL VSSSS R+FPS TRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSS-RSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_022952105.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita moschata]1.04e-3879.79Show/hide
Query:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MAS+ RSLL AAAA  SRSMAGRTR LAH TL P+ VSSSSR F S++RI SSLA+V+SLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_023553689.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo]7.32e-3980.85Show/hide
Query:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASV RSLL AAAA  SRSMAGRTR LAH TL P+ VSSSSR F S++RI SSLA+V+SLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

XP_038887804.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial [Benincasa hispida]1.03e-4286.96Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASV RSLLTAAA SRSMAGRTR LAHKTLNPLLVSSSSR F S++RIVSSLA VESLMPLH+AVASARLKSKIAVDSHCW WLSEGF T L
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

TrEMBL top hitse value%identityAlignment
A0A0A0K7P3 Uncharacterized protein4.6e-3291.4Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLV-SSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLT AAASRSM GRT+ LAHKTLNPL V SSSSR+FPS TRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLV-SSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A1S3BGG1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like1.1e-38100Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A5D3BYV0 Protein NUCLEAR FUSION DEFECTIVE 61.1e-38100Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A6J1GKU0 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like1.2e-2779.79Show/hide
Query:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MAS+ RSLL AAAA  SRSMAGRTR LAH TL P+ VSSSSR F S++RI SSLA+V+SLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAAA--SRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

A0A6J1I675 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial7.6e-2779.57Show/hide
Query:  MASVSRSLLTAAA-ASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MASV RSLL AAA  SRSMAGRTR LAH TL P+ VSSSSR F S++RI  SLA+V+SLMPLH+AVASARLKSKIAVDSHCWSWLSEGFAT L
Subjt:  MASVSRSLLTAAA-ASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70350.1 unknown protein3.6e-0538.64Show/hide
Query:  TAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVE-----SLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        ++AA S S  G++  +A          SSS + PS+ R+  S   VE     SL+PLH+  ASA L S +++ +  WS LSEGFA++L
Subjt:  TAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVE-----SLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

AT2G20585.3 nuclear fusion defective 69.0e-0432.95Show/hide
Query:  SVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRI---VSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEG
        S +RS+L AA++  + A   R  +     P L  +++R  P ++ +   V     VESL+P H+A ASA + SK+++    + WLS+G
Subjt:  SVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRI---VSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEG

AT4G39300.1 unknown protein1.5e-1450Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLN--PLLVS----SSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL
        MAS  RS L   A SR++  R+R +  K+LN  P   S    S S+S P  +R++S+L +VE+++PLH+AVASARL+S IA DS CWS LS+G AT L
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLN--PLLVS----SSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL

AT4G39300.2 unknown protein1.8e-1248.91Show/hide
Query:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLN--PLLVS----SSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSE
        MAS  RS L   A SR++  R+R +  K+LN  P   S    S S+S P  +R++S+L +VE+++PLH+AVASARL+S IA DS CWS LS+
Subjt:  MASVSRSLLTAAAASRSMAGRTRPLAHKTLN--PLLVS----SSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGGCGGCTTCCAGGTCCATGGCCGGCCGTACCAGACCACTTGCTCATAAAACCCTAAATCCATTGCTTGTTTCTTC
TTCCTCCAGAAGCTTTCCTTCCATTACCAGGATTGTTTCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCTTCGGCTCGGCTGAAGTCCAAAA
TTGCCGTCGACTCTCATTGCTGGAGCTGGCTTTCTGAAGGATTTGCAACATCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAACCCAAAGAAACTTTCTTCACTATAAAAATCCAATTGCTAAACCCGCCTCCAGCGGTGTGTCAAAGAAATGGCTTCCGTTTCCCGATCGCTTCTTACGGCGGCGG
CGGCTTCCAGGTCCATGGCCGGCCGTACCAGACCACTTGCTCATAAAACCCTAAATCCATTGCTTGTTTCTTCTTCCTCCAGAAGCTTTCCTTCCATTACCAGGATTGTT
TCGTCTTTGGCTAATGTGGAGTCTTTGATGCCACTCCACACCGCCGTCGCTTCGGCTCGGCTGAAGTCCAAAATTGCCGTCGACTCTCATTGCTGGAGCTGGCTTTCTGA
AGGATTTGCAACATCTTTGTGACATAGCATGGTTGGTGAAGGTGAATTGTAATTGATAATACGGCTGAATGACTGGTAGCTGAAACGACCTTCCATTGGACTTGTGAGGT
TTTTCCATCTTTCCTACTTATCTTTGTAAGATACCTTTATCACAAGGAAGAATCATTTAGACAACTATTTTTTCGTTTTTATCGTTGTATAATGCAATGCGGCCACATTT
TCTGGATATGCAGAGAGCTATTGTTTTAAGCCTTTGAACACAAAGCTTGCAGTTTAGATTTTTGTTAGGCATCCCTCTTGCTCTTGACTTGTTCAATAACA
Protein sequenceShow/hide protein sequence
MASVSRSLLTAAAASRSMAGRTRPLAHKTLNPLLVSSSSRSFPSITRIVSSLANVESLMPLHTAVASARLKSKIAVDSHCWSWLSEGFATSL