| GenBank top hits | e value | %identity | Alignment |
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| KAA0042457.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.02e-100 | 64.26 | Show/hide |
Query: GVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGPVGHS-------
G RSS SSH IS GSH+A+S+RVV E GKSSVCYNC +PGHYRRDCPHLIP NTI+KTTS V+QQPRTTRTS +GSSGGKQKGPVG S
Subjt: GVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGPVGHS-------
Query: -------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIFFKRPGKNEIIFRGDRKILS
DA NVVI GDSFIVNSVY+ C V IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+ EI FKRPGK
Subjt: -------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIFFKRPGKNEIIFRGDRKILS
Query: TYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
GC YLA+V+DTQVSKLKLEDI +VREFPDVF KELSGL D+EIEFSIDLV G APISQAP
Subjt: TYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
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| KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa] | 5.51e-126 | 69.33 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKSGS GG RSS SSH IS GSH+A+S+RVV E KSSVCYNCG+PGHYRRDCPHLIP NTI+KTTSQ V+QQPR T TS +GSSGGKQKGP
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
VG S DA NVV ELLIST +GDSFIVNSVY+ C + IDGETLEVDL LNI EFD+ILGM+FLSNHYASL CH+
Subjt: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
Query: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
EI FKRPG +EI+FRGDRKIL T VI ALKA+KLLRKGC YL +V+DTQVSKLKLEDIP+VREFPDVF +ELS L D+EIEFSIDLV G PISQAP
Subjt: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
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| KAA0067055.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.77e-122 | 68.23 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKSG G RSS S+H IS GSH+A+S+RV+ + GKSSVCYNCG+ GHYRRDCPHLIP NTI+KTTSQ V+QQ RTTRTS +GSSG KQ G
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
VG S DA NVV ELLIST VGDSFIVNSVY+ C + ID ETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+
Subjt: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
Query: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQA
EI FKRP K+EIIF GDRKIL TYVI LKA+KLLRKGC YLA+VMDTQ+SKLKLEDIP+VREFPDVF +ELSG+ D+EIEFSIDLV GMAPISQA
Subjt: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQA
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| TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa] | 1.19e-98 | 67.3 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKS S GG RSS SSH+IS GSHVA+SNRVV E GKSSVCYNC + GHYRRDCPHLIP SNTI+KTTSQ V QQ RTT TS +GSSGGKQKG
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI--------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIF
VG S DA N+V + GDSFIVNSVY+ C + IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+ EI
Subjt: VGHS--------------PDALNVVI--------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIF
Query: FKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFP
FKRP K+EIIFRG+RKIL TYVI ALKA+KLLRKGC YLAHVMDTQ+SKL LEDIP+ R P
Subjt: FKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFP
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| TYK22919.1 reverse transcriptase [Cucumis melo var. makuwa] | 2.02e-100 | 64.26 | Show/hide |
Query: GVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGPVGHS-------
G RSS SSH IS GSH+A+S+RVV E GKSSVCYNC +PGHYRRDCPHLIP NTI+KTTS V+QQPRTTRTS +GSSGGKQKGPVG S
Subjt: GVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGPVGHS-------
Query: -------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIFFKRPGKNEIIFRGDRKILS
DA NVVI GDSFIVNSVY+ C V IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+ EI FKRPGK
Subjt: -------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIFFKRPGKNEIIFRGDRKILS
Query: TYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
GC YLA+V+DTQVSKLKLEDI +VREFPDVF KELSGL D+EIEFSIDLV G APISQAP
Subjt: TYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7TL70 Reverse transcriptase | 6.7e-83 | 60.07 | Show/hide |
Query: EINQVKEEVEDLCQGGSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTT
E + +E +++ SS ++ G RSS SSH IS GSH+A+S+RVV E GKSSVCYNC +PGHYRRDCPHLIP NTI+KTTS V+QQPRTT
Subjt: EINQVKEEVEDLCQGGSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTT
Query: RTSCKGSSGGKQKGPVGHS--------------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLK
RTS +GSSGGKQKGPVG S DA NVVI GDSFIVNSVY+ C V IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL
Subjt: RTSCKGSSGGKQKGPVGHS--------------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLK
Query: CHKNEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPIS
CH+ EI FKRPG KGC YLA+V+DTQVSKLKLEDI +VREFPDVF KELSGL D+EIEFSIDLV G APIS
Subjt: CHKNEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPIS
Query: QAP
QAP
Subjt: QAP
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| A0A5A7UZM6 Gag protease polyprotein-like protein | 2.9e-102 | 69.33 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKSGS GG RSS SSH IS GSH+A+S+RVV E KSSVCYNCG+PGHYRRDCPHLIP NTI+KTTSQ V+QQPR T TS +GSSGGKQKGP
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
VG S DA NVV ELLIST +GDSFIVNSVY+ C + IDGETLEVDL LNI EFD+ILGM+FLSNHYASL CH+
Subjt: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
Query: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
EI FKRPG +EI+FRGDRKIL T VI ALKA+KLLRKGC YL +V+DTQVSKLKLEDIP+VREFPDVF +ELS L D+EIEFSIDLV G PISQAP
Subjt: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQAP
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| A0A5D3BB91 Reverse transcriptase | 2.3e-83 | 67.3 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKS S GG RSS SSH+IS GSHVA+SNRVV E GKSSVCYNC + GHYRRDCPHLIP SNTI+KTTSQ V QQ RTT TS +GSSGGKQKG
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI--------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIF
VG S DA N+V + GDSFIVNSVY+ C + IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+ EI
Subjt: VGHS--------------PDALNVVI--------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHKNEIF
Query: FKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFP
FKRP K+EIIFRG+RKIL TYVI ALKA+KLLRKGC YLAHVMDTQ+SKL LEDIP+ R P
Subjt: FKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFP
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| A0A5D3DI38 Reverse transcriptase | 6.7e-83 | 60.07 | Show/hide |
Query: EINQVKEEVEDLCQGGSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTT
E + +E +++ SS ++ G RSS SSH IS GSH+A+S+RVV E GKSSVCYNC +PGHYRRDCPHLIP NTI+KTTS V+QQPRTT
Subjt: EINQVKEEVEDLCQGGSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTT
Query: RTSCKGSSGGKQKGPVGHS--------------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLK
RTS +GSSGGKQKGPVG S DA NVVI GDSFIVNSVY+ C V IDGETLEVDLI LNI EFD+ILGM+FLSNHYASL
Subjt: RTSCKGSSGGKQKGPVGHS--------------PDALNVVIELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLK
Query: CHKNEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPIS
CH+ EI FKRPG KGC YLA+V+DTQVSKLKLEDI +VREFPDVF KELSGL D+EIEFSIDLV G APIS
Subjt: CHKNEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPIS
Query: QAP
QAP
Subjt: QAP
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| A0A5D3DS52 Reverse transcriptase | 2.3e-99 | 68.23 | Show/hide |
Query: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
GSSFSKSG G RSS S+H IS GSH+A+S+RV+ + GKSSVCYNCG+ GHYRRDCPHLIP NTI+KTTSQ V+QQ RTTRTS +GSSG KQ G
Subjt: GSSFSKSGSYGGVHRSSVSSHSISPIEGSHVAQSNRVVLEFGKSSVCYNCGKPGHYRRDCPHLIPESNTIMKTTSQIVNQQPRTTRTSCKGSSGGKQKGP
Query: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
VG S DA NVV ELLIST VGDSFIVNSVY+ C + ID ETLEVDLI LNI EFD+ILGM+FLSNHYASL CH+
Subjt: VGHS--------------PDALNVVI------------ELLISTPVGDSFIVNSVYQNCMVHIDGETLEVDLILLNIHEFDIILGMNFLSNHYASLKCHK
Query: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQA
EI FKRP K+EIIF GDRKIL TYVI LKA+KLLRKGC YLA+VMDTQ+SKLKLEDIP+VREFPDVF +ELSG+ D+EIEFSIDLV GMAPISQA
Subjt: NEIFFKRPGKNEIIFRGDRKILSTYVIFALKATKLLRKGCMTYLAHVMDTQVSKLKLEDIPMVREFPDVFLKELSGLQLDKEIEFSIDLVFGMAPISQA
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