; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0015919 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015919
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear pore complex protein NUP62
Genome locationchr11:28533825..28540370
RNA-Seq ExpressionIVF0015919
SyntenyIVF0015919
Gene Ontology termsGO:0006405 - RNA export from nucleus (biological process)
GO:0006606 - protein import into nucleus (biological process)
GO:0010930 - negative regulation of auxin mediated signaling pathway (biological process)
GO:0034399 - nuclear periphery (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007758 - Nucleoporin, NSP1-like, C-terminal
IPR026010 - Nucleoporin NSP1/NUP62


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK24755.1 nuclear pore complex protein NUP62 [Cucumis melo var. makuwa]6.21e-16099.62Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

XP_008459731.1 PREDICTED: nuclear pore complex protein NUP62 [Cucumis melo]4.20e-15499.62Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

XP_022156652.1 nuclear pore complex protein NUP62, partial [Momordica charantia]4.55e-15095.4Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSL SASTAATT+SGFSA SQSQTSS LVVASSSSGTTSTVSA VS+TPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELE+KLELIETHQQEVDKALLSVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

XP_031743587.1 nuclear pore complex protein NUP62 [Cucumis sativus]3.40e-15298.47Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKAL+SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQK WMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

XP_038874708.1 nuclear pore complex protein NUP62 [Benincasa hispida]1.96e-14996.55Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSL SA T ATTTSGFSASSQSQTSS LVVASSSSGTTSTV+ATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVE+QAELEKKLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

TrEMBL top hitse value%identityAlignment
A0A0A0KA27 Nsp1_C domain-containing protein1.7e-12598.08Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEII EWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKAL+SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQK WMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

A0A1S3CAD4 nuclear pore complex protein NUP621.4e-12799.62Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

A0A5D3DMB1 Nuclear pore complex protein NUP621.4e-12799.62Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

A0A6J1DSI7 nuclear pore complex protein NUP627.8e-12395.4Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GFPSL SASTAATT+SGFSA SQSQTSS LVVASSSSGTTSTVSA VS+TPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQAELE+KLELIETHQQEVDKALLSVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK+AAT+GPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

A0A6J1L2D4 nuclear pore complex protein NUP624.3e-12195.02Show/hide
Query:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        S GF SLASAS AATTTSG +ASSQSQTSS LVVASSSSGTTSTVSATVS+TPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI+QNR
Subjt:  SIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        DILLRLEIEVAKVVETQ ELEKKLELIETHQQEVDKAL SVE+DAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNA+QGGE
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAAT+GPAADRELLGQKFWMS
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

SwissProt top hitse value%identityAlignment
G0SBQ3 Nucleoporin NSP15.7e-1428.69Show/hide
Query:  ASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSA-TVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRL
        AS S  ATTT+    S  S T+S       +  TT+ + A TV    +LP  +  KT++EII  W  +L +   +F++QA  + EWDR +++N + + +L
Subjt:  ASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSA-TVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRL

Query:  EIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAA---STRDAMYEQAEYIERELEQMTEQIKSIIQTLN-----ANQG
             +      E+E++L  +E+ Q+E+   L   E + + +Y  + G    ++AA     R+  Y+ AE +  +L++M + +  +I+ +N      ++G
Subjt:  EIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAA---STRDAMYEQAEYIERELEQMTEQIKSIIQTLN-----ANQG

Query:  GELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRI---QKLAATEG
         + D      PL  +VR+LN  L+ L WID  A    +++   QK A + G
Subjt:  GELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRI---QKLAATEG

P17955 Nuclear pore glycoprotein p621.4e-1529.1Show/hide
Query:  SLASASTAATTTSGFSASSQSQTSSALVVA---------SSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI
        S  S +T  TTT+  +++S S T++   ++         SS + T    S+T   T   P+ +T   +E +I +W+ EL+++   F +QA  +  WDR +
Subjt:  SLASASTAATTTSGFSASSQSQTSSALVVA---------SSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRI

Query:  MQNRDILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNAN
        ++N + +  L  EV KV   Q  L+++L+ I + Q+E++  L  +E+      K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN  
Subjt:  MQNRDILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNAN

Query:  QGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK
         GG  D  D   PL  + +ILN  + SL W+D+ +     R+++
Subjt:  QGGELDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQK

P37198 Nuclear pore glycoprotein p623.0e-1528.06Show/hide
Query:  SASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTP--------KLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR
        + STAAT T+  ++SS +   +  +   + +G  S  +A V++ P           S +T   +E +I +W+ EL+++   F +QA  +  WDR +++N 
Subjt:  SASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTP--------KLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNR

Query:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
        + +  L  EV KV   Q  L+++L+ I + Q+E++  L  +E+    + K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN + G  
Subjt:  DILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE

Query:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLA-ATEGPAADRE
         D  D   PL  + +ILN  + SL WID+ +     +++++    EG   ++E
Subjt:  LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLA-ATEGPAADRE

Q63850 Nuclear pore glycoprotein p622.5e-1730.49Show/hide
Query:  ASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLE
        A+A+ A+TTT+GF+ S +   S+     SS + T    S+T + T   P+ +T   +E +I +W+ EL+++   F +QA  +  WDR +++N + +  L 
Subjt:  ASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILLRLE

Query:  IEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGM
         EV KV   Q  L+++L+ I + Q+E++  L  +E+      K++ G +    A   R+  Y+ AE I+ +L++M + +K II+ LN   GG  D  D  
Subjt:  IEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGM

Query:  TPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLA-ATEGPAADRE
         PL  + +ILN  + SL W+D+ +     R+++ +   EG   ++E
Subjt:  TPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLA-ATEGPAADRE

Q8L7F7 Nuclear pore complex protein NUP627.6e-9173.15Show/hide
Query:  PSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILL
        P+ + +  ++T+T+  + SS + T + LVV SSS   TST  A V+ +PKLPSEITGKTVEEIIKEWN ELQERTG+FRKQANAIAEWD+RI+QNRD+LL
Subjt:  PSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILL

Query:  RLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI
        RLEIEVAKVVETQ+ LE++LELIETHQQEVDKAL S+E++AERIY DER  LLDDEAASTRDAMYEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ I
Subjt:  RLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI

Query:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        DGM+PLD VVRILNNQLSSLMWIDEKAEEFSSRIQK+ A +G   DREL+  K WMS
Subjt:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS

Arabidopsis top hitse value%identityAlignment
AT2G45000.1 structural constituent of nuclear pore5.4e-9273.15Show/hide
Query:  PSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILL
        P+ + +  ++T+T+  + SS + T + LVV SSS   TST  A V+ +PKLPSEITGKTVEEIIKEWN ELQERTG+FRKQANAIAEWD+RI+QNRD+LL
Subjt:  PSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIAEWDRRIMQNRDILL

Query:  RLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI
        RLEIEVAKVVETQ+ LE++LELIETHQQEVDKAL S+E++AERIY DER  LLDDEAASTRDAMYEQ+E +ERELE MTEQI+SIIQ++NANQGGEL+ I
Subjt:  RLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVI

Query:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS
        DGM+PLD VVRILNNQLSSLMWIDEKAEEFSSRIQK+ A +G   DREL+  K WMS
Subjt:  DGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAAGATCAAGGGAGCTTACACTTCTTGTAACATTGATGATTTACTTCTTATTGTCAATTGGCTTCCCTTCTCTGGCATCCGCTTCTACTGCTGCTACCACCAC
ATCCGGTTTCAGTGCTTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTAGCAAGCAGTAGTAGTGGTACAACTTCAACTGTTAGTGCAACAGTGTCTTCTACACCAA
AACTACCATCTGAGATAACAGGGAAGACTGTTGAAGAGATCATAAAGGAATGGAATGCAGAGCTCCAAGAGCGTACCGGAAAGTTTCGAAAGCAGGCCAATGCTATTGCT
GAGTGGGATAGGAGGATAATGCAAAATCGTGATATTCTTCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGTTGGAGAAGAAATTGGAGTTGAT
CGAAACTCACCAACAAGAGGTTGATAAGGCATTGCTAAGCGTGGAAGATGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAGGCTGCATCTA
CAAGGGATGCAATGTACGAGCAAGCTGAATATATAGAGCGGGAATTAGAGCAGATGACAGAACAGATCAAATCAATTATCCAGACCCTAAATGCGAACCAGGGAGGTGAA
CTTGATGTGATTGATGGGATGACACCGCTAGATGCTGTTGTTCGAATTTTAAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTTTTCTTCACG
TATTCAGAAGCTTGCTGCTACCGAGGGTCCGGCTGCCGATCGTGAACTGCTGGGTCAGAAGTTCTGGATGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAAGATCAAGGGAGCTTACACTTCTTGTAACATTGATGATTTACTTCTTATTGTCAATTGGCTTCCCTTCTCTGGCATCCGCTTCTACTGCTGCTACCACCAC
ATCCGGTTTCAGTGCTTCAAGTCAGAGTCAGACTTCATCAGCTCTTGTTGTAGCAAGCAGTAGTAGTGGTACAACTTCAACTGTTAGTGCAACAGTGTCTTCTACACCAA
AACTACCATCTGAGATAACAGGGAAGACTGTTGAAGAGATCATAAAGGAATGGAATGCAGAGCTCCAAGAGCGTACCGGAAAGTTTCGAAAGCAGGCCAATGCTATTGCT
GAGTGGGATAGGAGGATAATGCAAAATCGTGATATTCTTCTTAGACTTGAGATTGAAGTTGCAAAGGTGGTTGAGACCCAAGCTGAGTTGGAGAAGAAATTGGAGTTGAT
CGAAACTCACCAACAAGAGGTTGATAAGGCATTGCTAAGCGTGGAAGATGATGCTGAGCGCATTTACAAGGATGAACGTGGTTTACTTCTTGACGATGAGGCTGCATCTA
CAAGGGATGCAATGTACGAGCAAGCTGAATATATAGAGCGGGAATTAGAGCAGATGACAGAACAGATCAAATCAATTATCCAGACCCTAAATGCGAACCAGGGAGGTGAA
CTTGATGTGATTGATGGGATGACACCGCTAGATGCTGTTGTTCGAATTTTAAACAATCAATTAAGTTCATTAATGTGGATCGATGAAAAGGCCGAAGAGTTTTCTTCACG
TATTCAGAAGCTTGCTGCTACCGAGGGTCCGGCTGCCGATCGTGAACTGCTGGGTCAGAAGTTCTGGATGTCTTAA
Protein sequenceShow/hide protein sequence
MLERSRELTLLVTLMIYFLLSIGFPSLASASTAATTTSGFSASSQSQTSSALVVASSSSGTTSTVSATVSSTPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIA
EWDRRIMQNRDILLRLEIEVAKVVETQAELEKKLELIETHQQEVDKALLSVEDDAERIYKDERGLLLDDEAASTRDAMYEQAEYIERELEQMTEQIKSIIQTLNANQGGE
LDVIDGMTPLDAVVRILNNQLSSLMWIDEKAEEFSSRIQKLAATEGPAADRELLGQKFWMS