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IVF0015922 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0015922
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGCK domain-containing protein
Genome locationchr10:2257502..2258768
RNA-Seq ExpressionIVF0015922
SyntenyIVF0015922
Gene Ontology termsGO:0006414 - translational elongation (biological process)
GO:0003746 - translation elongation factor activity (molecular function)
InterPro domainsIPR012891 - GCK


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446394.1 PREDICTED: transcription elongation factor spt5-like [Cucumis melo]7.20e-118100Show/hide
Query:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
        MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
Subjt:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG

Query:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
        CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
Subjt:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

XP_011655692.1 uncharacterized protein LOC105435574 [Cucumis sativus]3.46e-9591.72Show/hide
Query:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDIEEEEE    GECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

XP_022151071.1 uncharacterized protein LOC111019093 [Momordica charantia]9.34e-7773.47Show/hide
Query:  TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRD
        T S++NP  PPAPTRMSTSESKLQ +ESNAA SKTLEDQ    S    +EK+S E   SGKI ESGG DEGGED+ EEEEEEE GECGFCLFMKGGGCRD
Subjt:  TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRD

Query:  SFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASAGGK
        SF+ WEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAH DYY PILKAEK+AEEEAIIELEKE+A +A+Q++ NS            +EQKASAGGK
Subjt:  SFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASAGGK

XP_022997117.1 uncharacterized protein LOC111492108 [Cucurbita maxima]9.69e-7373.89Show/hide
Query:  MSTSESKLQDAESNAAAS--KTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE
        MSTSESKLQDAESNAAA+  KT EDQ Q  + +HS+EKS +E+  SGKISESGG DEGGED++EEEE    GECGFCLFMKGGGCRDSF+ WEKCIEEAE
Subjt:  MSTSESKLQDAESNAAAS--KTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE

Query:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA
        KNKEDIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE  P+A+Q+ T+S            +EQKASA
Subjt:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA

XP_038893081.1 uncharacterized protein LOC120081968 [Benincasa hispida]1.53e-8077.35Show/hide
Query:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAES AAA+KTLEDQPQS S++ S+EK SEE++ SG+I ESGGGDE GED+EEEEE    GECGFCLFMKGGGC+DSFI WEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAEEEAIIELEKEI P+A+Q+++NS            +EQKASAGGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASAGGK

TrEMBL top hitse value%identityAlignment
A0A0A0KU46 GCK domain-containing protein2.2e-7391.72Show/hide
Query:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
        MSTSESKLQDAESNAAA+KTLEDQPQSD+ ++S+EKSSEEASLSGKISESGGGDEGGEDI    EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN
Subjt:  MSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN

Query:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
        KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKE  PSASQ+DTNSDEQKAS GGK
Subjt:  KEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

A0A1S3BFM8 transcription elongation factor spt5-like6.8e-91100Show/hide
Query:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
        MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
Subjt:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG

Query:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
        CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
Subjt:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

A0A5A7SVC8 Transcription elongation factor spt5-like6.8e-91100Show/hide
Query:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
        MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG
Subjt:  MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGG

Query:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
        CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK
Subjt:  CRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK

A0A6J1DDG6 uncharacterized protein LOC1110190932.1e-6073.47Show/hide
Query:  TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRD
        T S++NP  PPAPTRMSTSESKLQ +ESNAA SKTLEDQ    S    +EK+S E   SGKI ESGG DEGGED+  EEEEEEEGECGFCLFMKGGGCRD
Subjt:  TLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRD

Query:  SFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQED------------TNSDEQKASAGGK
        SF+ WEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAH DYY PILKAEK+AEEEAIIELEKE+A +A+Q++             NS+EQKASAGGK
Subjt:  SFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQED------------TNSDEQKASAGGK

A0A6J1K434 uncharacterized protein LOC1114921083.2e-5673.89Show/hide
Query:  MSTSESKLQDAESN--AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE
        MSTSESKLQDAESN  AAA+KT EDQ Q  + +HS+EKS +E+  SGKISESGG DEGGED+    +EEEEGECGFCLFMKGGGCRDSF+ WEKCIEEAE
Subjt:  MSTSESKLQDAESN--AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAE

Query:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA
        KNKEDIVEKCFEVTGALKKCMEAH DYYEPILKAEKMAE EAIIELEKE  P+A+Q+ T+S            +EQKASA
Subjt:  KNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNS------------DEQKASA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14048.1 GCK domain-containing protein1.8e-0638.24Show/hide
Query:  GEDIEEEE--EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELEKEIAPSAS
        GE +   E  EEEE+GE  F  FM+GGGC++ F  WE C +EA             V   + KCM     D+Y P L A+K A+E     +EKE+    S
Subjt:  GEDIEEEE--EEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCME-AHPDYYEPILKAEKMAEEEAIIELEKEIAPSAS

Query:  QE
        +E
Subjt:  QE

AT1G14060.1 GCK domain-containing protein1.9e-2949.16Show/hide
Query:  SSSNPIAPPAPTRMSTSESKLQDAE-SNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDS
        S +N  APPA         KL DA  S  A S+ L D       S +  +  E++    K  E GGGD  G         EEEGECGFCLFMKGGGC+DS
Subjt:  SSSNPIAPPAPTRMSTSESKLQDAE-SNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDS

Query:  FIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKAS
        F+AWE+C+E AEKNKEDIV  C EVT  LKKCM+ H DYY+PIL AEK AE E   ELE E      +E+  S+E+ A+
Subjt:  FIAWEKCIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKAS

AT5G02210.1 GCK domain-containing protein9.7e-1342.86Show/hide
Query:  EKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPIL
        ++S+EE+ +   +S +       ++I EEE+++      F  FMKGGGC++SF AW + C    EEAEKNK D+V KC  + G   KCM+ H DYY PIL
Subjt:  EKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAW-EKC---IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPIL

Query:  KAEKMAEEEAIIELEKEIA
          +K  EE     LEKE+A
Subjt:  KAEKMAEEEAIIELEKEIA

AT5G57570.1 GCK domain-containing protein9.7e-1338.21Show/hide
Query:  AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTG
        ++ S    D+  S +         E  +L   ++E+G G         + EEEE GEC  C F+KGG C++SFIA E+C++EAE++ +E    KC EV  
Subjt:  AAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEKCIEEAEKN-KEDIVEKCFEVTG

Query:  ALKKCMEAHPDYYEPILKAEKMA
          K CM  +P YYEPIL  E  A
Subjt:  ALKKCMEAHPDYYEPILKAEKMA

AT5G57640.1 GCK domain-containing protein1.8e-1133.76Show/hide
Query:  STSESKLQD------AESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEE--EEEEEEEGECGFCLFMKGGGCRDSFIAWEKC
        S +E+K ++       + +  + +TL +  +    S +  +   +   S  + E  G +E  + ++E  +E EEE GEC  C F+KGG C+++F   E C
Subjt:  STSESKLQD------AESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEE--EEEEEEEGECGFCLFMKGGGCRDSFIAWEKC

Query:  IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIEL---EKE
         +EA+KN ED V KC E     K CM  +P YYEP+L  E  A  + + EL   EKE
Subjt:  IEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIEL---EKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCGACACTGTCATCTTCGAATCCGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGCAGAATCTAACGCCGCCGCCAGTAA
AACCCTGGAAGATCAACCACAATCGGATTCCGCAAGTCACTCTGATGAAAAATCTTCCGAGGAAGCAAGTCTATCAGGAAAGATTTCCGAGAGTGGAGGTGGAGACGAAG
GAGGAGAAGACATAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAGAGATAGCTTCATTGCGTGGGAAAAG
TGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACAGGGGCATTGAAGAAGTGTATGGAAGCTCATCCAGATTATTACGAACCGAT
TCTGAAGGCGGAGAAAATGGCTGAGGAAGAAGCGATTATAGAATTGGAGAAGGAAATAGCTCCAAGTGCTTCCCAGGAAGATACGAATTCCGATGAACAGAAGGCCTCTG
CGGGAGGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTTAGCTTCAACAACAAGGAAGAGAAAGGAAAAGGAAACCCCTTGTTGAGCTTGATTCATTCCTGAGGGTTTTTGGGGGTTTAAGCCGCCGGCGGTGGAACGACGAA
CCATTCCTCCACAGCTTACCTAATGACATCGACACTGTCATCTTCGAATCCGATTGCTCCTCCGGCACCGACTAGGATGTCTACTTCGGAGTCGAAACTCCAAGACGCAG
AATCTAACGCCGCCGCCAGTAAAACCCTGGAAGATCAACCACAATCGGATTCCGCAAGTCACTCTGATGAAAAATCTTCCGAGGAAGCAAGTCTATCAGGAAAGATTTCC
GAGAGTGGAGGTGGAGACGAAGGAGGAGAAGACATAGAAGAGGAAGAGGAAGAGGAAGAGGAAGGGGAATGTGGGTTTTGCTTGTTTATGAAAGGCGGTGGTTGCAGAGA
TAGCTTCATTGCGTGGGAAAAGTGTATTGAGGAGGCGGAGAAGAACAAGGAGGATATTGTGGAGAAATGCTTTGAAGTGACAGGGGCATTGAAGAAGTGTATGGAAGCTC
ATCCAGATTATTACGAACCGATTCTGAAGGCGGAGAAAATGGCTGAGGAAGAAGCGATTATAGAATTGGAGAAGGAAATAGCTCCAAGTGCTTCCCAGGAAGATACGAAT
TCCGATGAACAGAAGGCCTCTGCGGGAGGTAAGTGAAGTTGGTTGCTGCTCGTTGGATCTGATTCTTGAAGCGGAAAAACATCATTTTGTTGAGAGTACTTTAGTTTCTA
GTCGATCTTTTAACAGGCTGTGGAAGATATCTTCCTTAAACTCTTTGTCTTAGTGCACCTAAAGCTGATTCCTTTATCTGAAAGTATCATAGGAAAGAAGAGATCTTACC
TTACACCACTTCTGATTTAATTCAAATTTCTGAATAATTATTCATGCCATTGTTGTTTAGTATCATTTTTCACAATCATATTCCCTAATGTGTCTTTGTCGTCTAGATTG
AGGCTCCATCTGAATTCCCCCTTTCAGCTATGGTTGGAGACATTGGCAAAAATCATTACTTGTCACTTCATTTATGAACTATGTGTTCTTAATAAGAACTTCACTTGTGA
ACTGTGTAACACGTGATCTTTTTCCCTTTTAGAAACTTTCTGGTTTGTATGTACAAGAGTTGCATGGTTTAACCTTTCATCTGGACTTTGTGGAGACTAATTTGATGCTT
TCTTGGTTTCCTGTGTGTGGCATGGGAACTAATTCTTGTTGACTGTTGAAAGAGGTG
Protein sequenceShow/hide protein sequence
MTSTLSSSNPIAPPAPTRMSTSESKLQDAESNAAASKTLEDQPQSDSASHSDEKSSEEASLSGKISESGGGDEGGEDIEEEEEEEEEGECGFCLFMKGGGCRDSFIAWEK
CIEEAEKNKEDIVEKCFEVTGALKKCMEAHPDYYEPILKAEKMAEEEAIIELEKEIAPSASQEDTNSDEQKASAGGK