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IVF0016024 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016024
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr06:21487984..21488220
RNA-Seq ExpressionIVF0016024
SyntenyIVF0016024
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036099.1 retrotransposon protein [Cucumis melo var. makuwa]5.73e-1354.69Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL  C ++ TT ID RI TLKR      +  G + +GF WNDE KCI+A+KELFD WV+V N
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

KAA0046637.1 retrotransposon protein [Cucumis melo var. makuwa]2.86e-1356.25Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL  C ++ TT ID RI TLKR      +  G + +GF WNDE KCI+AKKELFD WV+V N
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

KAA0053616.1 retrotransposon protein [Cucumis melo var. makuwa]1.15e-1254.69Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL  C ++ TT ID RI TLKR      +  G + +GF WNDE KCI+A+KELFD WV+V N
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

KAA0059075.1 retrotransposon protein [Cucumis melo var. makuwa]1.15e-1254.69Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL  C ++ TT ID RI TLKR      +  G + +GF WNDE KCI+A+KELFD WV+V N
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

KAA0068155.1 retrotransposon protein [Cucumis melo var. makuwa]1.63e-1256.25Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL RC ++ TT ID RI TLK+      +  G S +GF WNDE KCI+AKKELFD WV+ D 
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

TrEMBL top hitse value%identityAlignment
A0A5A7TXH6 Retrotransposon protein1.6e-0956.25Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN
        AEKL  C ++ TT ID RI TLKR      +  G + +GF WNDE KCI+AKKELFD WV+V N
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN

A0A5A7U8I3 Retrotransposon protein1.6e-0957.38Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK
        AEKLS C ++ TT ID RI TLKR   +  +  G + +GF WNDE KCIIA+KELFD WV+
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK

A0A5A7VR00 Retrotransposon protein7.2e-1057.14Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVD
        AEKL RC ++ TT ID RI TLK+      +  G S +GF WNDE KCI+AKKELFD WV+ D
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVD

A0A5D3C8P0 Retrotransposon protein1.6e-0957.38Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK
        AEKLS C ++ TT ID RI TLKR   +  +  G + +GF WNDE KCIIA+KELFD WV+
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK

A0A5D3CM34 Retrotransposon protein9.4e-1057.38Show/hide
Query:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK
        AEKL  C I+ TT ID RI TLKR   +  +  G +++GF WNDE KCIIA+KELFD WV+
Subjt:  AEKLSRCTIQGTTTIDSRITTLKRC-SIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATGTTCAGACCCAGTTATCGGTACAGCTAGTGAGAATGATGCAGAGAAGCTGTCAAGATGTACCATCCAAGGGACCACTACTATTGACTCTCGGATCACGACCCT
AAAAAGATGTTCCATACCATATCAAAAATACGGAGCCTCATTCAATGGATTTAGTTGGAACGATGAGGTGAAGTGCATAATCGCTAAGAAGGAATTGTTCGACATTTGGG
TGAAGGTAGACAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATGTTCAGACCCAGTTATCGGTACAGCTAGTGAGAATGATGCAGAGAAGCTGTCAAGATGTACCATCCAAGGGACCACTACTATTGACTCTCGGATCACGACCCT
AAAAAGATGTTCCATACCATATCAAAAATACGGAGCCTCATTCAATGGATTTAGTTGGAACGATGAGGTGAAGTGCATAATCGCTAAGAAGGAATTGTTCGACATTTGGG
TGAAGGTAGACAATTAA
Protein sequenceShow/hide protein sequence
MACSDPVIGTASENDAEKLSRCTIQGTTTIDSRITTLKRCSIPYQKYGASFNGFSWNDEVKCIIAKKELFDIWVKVDN