CuGenDBv2

Gene ID	IVF0016036
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	tig00001929:49525..51791
RNA-Seq Expression	IVF0016036
Synteny	IVF0016036
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

1.02e-180

99.62

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE

Query:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
        VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGK+
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

1.29e-172

95.54

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA
        MSSMALFSPSSHLST SPS HHTTHFSFRPFSSLRTRNPSSSSSS LFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETS GSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

8.59e-184

100

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE

Query:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
        VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

1.11e-147

85.71

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS            ADNGAGISGGS  VAVE  V QKDPEPA   +ESLA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE

Query:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSL
Subjt:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK+
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

6.63e-170

94.05

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA
        MSSMALFSPSSHLSTLSPSSHH THFSFRPFSSLRTRNPSSSS   LFTIRATADNGAGISGGSA VAVETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEV EVVSKFEDPKW+NGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE +SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

6.4e-135

95.54

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA
        MSSMALFSPSSHLST SP SHHTTHFSFRPFSSLRTRNP SSSSSSLFTIRATADNGAGISGGSATV+VETPVEQKDPEPA      +ESLAGTNGSVAA
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA------EESLAGTNGSVAA

Query:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET SGSGKM
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

A0A1S3BLD8 uncharacterized protein LOC103490842

2.2e-143

100

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE

Query:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
        VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

A0A5A7TG76 Uncharacterized protein

6.4e-143

99.62

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
        MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVE

Query:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
        VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV
Subjt:  VVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGV

Query:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGK+
Subjt:  GLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

A0A6J1EC24 light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.3e-115

84.59

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS            ADNGAGISGGS  VAVE+ V QKDPEP    +E LA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE

Query:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSL
Subjt:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        TGVGLVGQMGNFFCKTLLF+AVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK+
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

8.6e-116

85.71

Show/hide

Query:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE
        MSSMALFSP S LS+LSPSSHH THF  RPFSSLR+RNPSS            ADNGAGISGGS  VAVE  V QKDPEPA   +ESLA TNGSVAA EE
Subjt:  MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPA---EESLAGTNGSVAAAEE

Query:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL
        VV VVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSIVPWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVDSL
Subjt:  VVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSL

Query:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM
        TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDET  GSGK+
Subjt:  TGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

3.5e-74

57.79

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNG-----AGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVA--AA
        SMALFSP    S  +P+              + T   S+   S +   RA++DNG       I   ++    E PV+     PAE S A  NG+V   A 
Subjt:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNG-----AGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVA--AA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSS
        SLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  SS
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

6.5e-76

58.15

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEV-----
        MALFSP    S+L  + +    FSF   SS R         S L   RA++D+G+     + +V    PVE    EP + + A      A A+ V     
Subjt:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEV-----

Query:  ----VEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
             E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  ----VEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ--DETSSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+  D+ S GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ--DETSSGSGK

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

4.6e-77

58.15

Show/hide

Query:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEV-----
        MALFSP    S+L  + +    FSF   SS R         S L   RA++D+G+     + +V    PVE    EP + + A      A A+ V     
Subjt:  MALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEV-----

Query:  ----VEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
             E V KF+D +W+NGTWDL QF+K+G TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSI+PWWAWIKRYHLPEAELLNGRAAM+GFFMAYFV
Subjt:  ----VEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ--DETSSGSGK
        DSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+  D+ S GS K
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ--DETSSGSGK

AT5G47110.1 Chlorophyll A-B binding family protein

2.5e-75

57.79

Show/hide

Query:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNG-----AGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVA--AA
        SMALFSP    S  +P+              + T   S+   S +   RA++DNG       I   ++    E PV+     PAE S A  NG+V   A 
Subjt:  SMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNG-----AGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVA--AA

Query:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        +   E V K+++ KWVNGTWDL QF+K+G TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSI+PWWAW+KRYHLPEAELLNGRAAM+GFFMAYFVD
Subjt:  EEVVEVVSKFEDPKWVNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSS
        SLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  SS
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCCTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACACAACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACTAG
AAACCCTTCTTCTTCTTCTTCCTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAATCTCAGGTGGTTCAGCTACTGTTGCTGTAGAAACCCCCGTCG
AGCAGAAGGATCCGGAGCCGGCCGAGGAGAGCCTTGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAAGAAGTTGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGG
GTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGATGCTGAGGCTAGGAGGAGGAAGTGGTTGGAAAACAATCCAGA
ATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTGCCAGAGGCTGAGCTACTCAATGGGCGTGCAG
CCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACATTGCTATTTGTTGCTGTGGTT
GGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATTTTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACATC
CTCAGGCTCAGGCAAAATGTAA

mRNA sequence

Show/hide mRNA sequence

TTTAAGAGAAGTATATGTTATTATTATTATATTATAGTAGTAAAATGACAAATGAATGTACAAAGGGCAAAGCTTCCCCATCCATCATAATTACAAGGCTGAGGATAGAG
CTTTAGAGCAGAAGCTCTCTCCCTCCCTTCTCCATAACAACAATGTCCTCCATGGCTTTGTTTTCTCCTTCATCCCATCTTTCTACTCTCTCTCCTTCTTCACACCACAC
AACCCATTTCTCCTTCAGACCCTTTTCTTCTCTCAGAACTAGAAACCCTTCTTCTTCTTCTTCCTCCTCTCTCTTCACTATCAGGGCCACAGCTGACAATGGTGCCGGAA
TCTCAGGTGGTTCAGCTACTGTTGCTGTAGAAACCCCCGTCGAGCAGAAGGATCCGGAGCCGGCCGAGGAGAGCCTTGCCGGAACCAATGGGTCGGTGGCGGCTGCTGAA
GAAGTTGTCGAGGTGGTTAGCAAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATTTGAATCAGTTCCAGAAAAATGGAAGTACTGATTGGGATGCTGTTATTGA
TGCTGAGGCTAGGAGGAGGAAGTGGTTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTGTTTGACACATCCATAGTTCCTTGGTGGGCTTGGATTAAGC
GCTACCATCTGCCAGAGGCTGAGCTACTCAATGGGCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTCGTTGATAGCTTGACAGGGGTAGGACTAGTAGGTCAAATG
GGCAACTTCTTCTGCAAAACATTGCTATTTGTTGCTGTGGTTGGAGTTCTTTTGATAAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAAACAACATT
TTATGACAAGCAATGGCAAGCAACTTGGCAGGATGAAACATCCTCAGGCTCAGGCAAAATGTAATACGGGAAAAGTTGCCTGTTTCTTGTTTTGTATGGATTATGTTTGT
ATCTCTAAAGATTTGGGCTAAGTAGAGAAAAGATAATGTGAGCTCTGAAAGATACTAAATCTTTAGGTCTCAGTTAAATGCTTCTTGAAGTTGAGGCTTCTCGAGTTTCA
ATGAAAATCTCTCCAAAAGAGCCTTGGTTTATCTGGAAATATGGGTATGAGGGTTCAGCTATTTTGATGGATTTATTATCAGATTTAGCTCAATCAGTTTCCCAAAATTC
CATTTTTGTTGTGCAAGAAGCATGTGGGGAAATTTTGGTTTGGTTTAAAGGGCCCTTTATTAACAGATGCATTTAGTACATATGCCTAAGGAGTCTTGAAGAAGAGTCAT
CCACCCAAGATTTGAGCATTTATTGAACTTAAAAG

Protein sequence

Show/hide protein sequence

MSSMALFSPSSHLSTLSPSSHHTTHFSFRPFSSLRTRNPSSSSSSSLFTIRATADNGAGISGGSATVAVETPVEQKDPEPAEESLAGTNGSVAAAEEVVEVVSKFEDPKW
VNGTWDLNQFQKNGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIVPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKTLLFVAVV
GVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDETSSGSGKM

IVF0016036 (gene) of Melon (IVF77) v1 genome