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IVF0016062 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016062
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBED-type domain-containing protein
Genome locationchr12:14476114..14476320
RNA-Seq ExpressionIVF0016062
SyntenyIVF0016062
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040972.1 uncharacterized protein E6C27_scaffold125G001750 [Cucumis melo var. makuwa]2.89e-3595.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

KAA0050353.1 hypothetical protein E6C27_scaffold88G00840 [Cucumis melo var. makuwa]7.12e-3595.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

KAA0053509.1 uncharacterized protein E6C27_scaffold190G00660 [Cucumis melo var. makuwa]2.31e-3595.52Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSK
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSK
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSK

KAA0066645.1 uncharacterized protein E6C27_scaffold979G00720 [Cucumis melo var. makuwa]4.04e-3595.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

XP_008460442.1 PREDICTED: uncharacterized protein LOC103499254 [Cucumis melo]6.25e-3795.52Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSK
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSK
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSK

TrEMBL top hitse value%identityAlignment
A0A5A7TBY2 Uncharacterized protein1.8e-2895.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

A0A5A7TY62 BED-type domain-containing protein1.8e-2895.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

A0A5A7U370 Uncharacterized protein1.8e-2895.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

A0A5A7VLM8 Uncharacterized protein1.8e-2895.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

A0A5D3DXN3 BED-type domain-containing protein1.8e-2895.59Show/hide
Query:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MEISNFIYVRPGLL MMRRFTNQKELVRPAKT FATACITLSSIHHQKNNLRKMF SDEWKDSKWSKE
Subjt:  MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22220.1 hAT transposon superfamily5.4e-0637.88Show/hide
Query:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        ++  IY   G+L +MR+FT   ++V+P  T  AT   T+  I   K  L+ M  S EW D  +SKE
Subjt:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

AT3G22220.2 hAT transposon superfamily5.4e-0637.88Show/hide
Query:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        ++  IY   G+L +MR+FT   ++V+P  T  AT   T+  I   K  L+ M  S EW D  +SKE
Subjt:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

AT4G15020.1 hAT transposon superfamily5.4e-0636.36Show/hide
Query:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        I+ F+Y   G+L +M +FT+  +++ PA +  AT   TL  I   K+NL+ M  S EW +  +S+E
Subjt:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

AT4G15020.2 hAT transposon superfamily5.4e-0636.36Show/hide
Query:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        I+ F+Y   G+L +M +FT+  +++ PA +  AT   TL  I   K+NL+ M  S EW +  +S+E
Subjt:  ISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related5.6e-1158.49Show/hide
Query:  MMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE
        MMR+FT  + L RPA T  AT+ ITL+  H  K+NLRKM +SDEW  SKW+KE
Subjt:  MMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCAACTTCATATATGTTCGTCCTGGATTATTAAAAATGATGCGACGATTTACTAACCAAAAGGAGTTAGTTAGACCAGCTAAGACTCCCTTTGCTACTGC
TTGCATTACATTATCGAGTATACATCATCAAAAGAACAACTTAAGAAAGATGTTTAATTCAGATGAATGGAAGGATAGCAAATGGAGCAAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTAGCAACTTCATATATGTTCGTCCTGGATTATTAAAAATGATGCGACGATTTACTAACCAAAAGGAGTTAGTTAGACCAGCTAAGACTCCCTTTGCTACTGC
TTGCATTACATTATCGAGTATACATCATCAAAAGAACAACTTAAGAAAGATGTTTAATTCAGATGAATGGAAGGATAGCAAATGGAGCAAGGAGTAA
Protein sequenceShow/hide protein sequence
MEISNFIYVRPGLLKMMRRFTNQKELVRPAKTPFATACITLSSIHHQKNNLRKMFNSDEWKDSKWSKE