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IVF0016123 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016123
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr10:16015359..16015526
RNA-Seq ExpressionIVF0016123
SyntenyIVF0016123
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032451.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]3.50e-0750.94Show/hide
Query:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS
        +K++GRGI D+   V+  S+GRG  DA      H V RGIPDV+L  RRKC S
Subjt:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS

KAA0049602.1 reverse transcriptase [Cucumis melo var. makuwa]1.76e-1155.56Show/hide
Query:  SEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS
        S  N+G GI D A C  IRS+G  + DAT+ADAC+G+ R I DV+LV RR+C S
Subjt:  SEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS

KAA0049649.1 transposon protein, putative, CACTA, En/Spm sub-class, expressed [Cucumis melo var. makuwa]4.62e-0440.38Show/hide
Query:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCF
        EK++GRGILD +  ++   VGRG  D       H +RRGIP+ +L  R   +
Subjt:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCF

TrEMBL top hitse value%identityAlignment
A0A5A7SSC5 CACTA en-spm transposon protein1.1e-0450.94Show/hide
Query:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS
        +K++GRGI D+   V+  S+GRG  DA      H V RGIPDV+L  RRKC S
Subjt:  EKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS

A0A5D3CX81 Reverse transcriptase2.8e-0855.56Show/hide
Query:  SEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS
        S  N+G GI D A C  IRS+G  + DAT+ADAC+G+ R I DV+LV RR+C S
Subjt:  SEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGAAAAAAACATCGGAAGAGGCATTCTCGACGTCGCATCATGTGTCAGCATAAGGTCCGTCGGGAGAGGAACTCTCGACGCCACTTTGGCCGACGCATGTCACGG
CGTCAGAAGAGGCATTCCTGACGTCATGTTGGTATGGCGTCGAAAATGCTTCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGAAAAAAACATCGGAAGAGGCATTCTCGACGTCGCATCATGTGTCAGCATAAGGTCCGTCGGGAGAGGAACTCTCGACGCCACTTTGGCCGACGCATGTCACGG
CGTCAGAAGAGGCATTCCTGACGTCATGTTGGTATGGCGTCGAAAATGCTTCTCCTAA
Protein sequenceShow/hide protein sequence
MSEKNIGRGILDVASCVSIRSVGRGTLDATLADACHGVRRGIPDVMLVWRRKCFS