CuGenDBv2

Gene ID	IVF0016188
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	ThiF domain-containing protein
Genome location	chr01:2996700..2997569
RNA-Seq Expression	IVF0016188
Synteny	IVF0016188
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004144589.1 uncharacterized protein LOC101204134 [Cucumis sativus]

1.18e-69

95.76

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS  SS LPIDS LLQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

XP_008455441.1 PREDICTED: uncharacterized protein LOC103495597 [Cucumis melo]

2.77e-75

100

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

XP_022952539.1 uncharacterized protein LOC111455201 [Cucurbita moschata]

1.60e-64

88.71

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS-LW
        MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PI SGLLQVNI DASP FAGRVYGPL LQRKKLLA+KS LW
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS-LW

Query:  FLASSPTNLTPDSPPDPVIEVLGG
        FLASSPTNLTPDSPPDPVI VLGG
Subjt:  FLASSPTNLTPDSPPDPVIEVLGG

XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]

9.87e-64

86.51

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Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PIDS LLQVNIVDASP FAGRVYGPL LQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS

Query:  LWFLASSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLASSPTNLTPDSPPDPVIEVLGG

XP_038888488.1 uncharacterized protein LOC120078321 [Benincasa hispida]

2.40e-70

93.44

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSS----LPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFL
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSS    +PIDSGLLQVNIVDASPSFAGRVYGPL LQRKKLLASKSLWFL
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSS----LPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFL

Query:  ASSPTNLTPDSPPDPVIEVLGG
         SSPTNLTPDSPPDPVIEVLGG
Subjt:  ASSPTNLTPDSPPDPVIEVLGG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3K2 Uncharacterized protein

1.8e-52

95.76

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS   SSLPIDS LLQVNIVDASPSFAGR YGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

A0A1S3C0X0 uncharacterized protein LOC103495597

9.1e-57

100

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

A0A5D3C9X6 Uncharacterized protein

9.1e-57

100

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
        MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSP

Query:  TNLTPDSPPDPVIEVLGG
        TNLTPDSPPDPVIEVLGG
Subjt:  TNLTPDSPPDPVIEVLGG

A0A6J1EXJ2 uncharacterized protein LOC111437092

2.2e-47

85.71

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Query:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS
        MNRRSR   RS  S SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST  SSL     PIDS LLQVNIVDASP FAGRVYGPL LQRKKLLA+KS
Subjt:  MNRRSR---RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKS

Query:  LWFLASSPTNLTPDSPPDPVIEVLGG
        LWFL+SSPTNLTPDSPPDPVIEVLGG
Subjt:  LWFLASSPTNLTPDSPPDPVIEVLGG

A0A6J1GLZ8 uncharacterized protein LOC111455201

1.2e-48

88.71

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Query:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASK-SLW
        MNRRSRRSGNS SETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYST SSSL     PI SGLLQVNI DASP FAGRVYGPL LQRKKLLA+K SLW
Subjt:  MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSL-----PIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASK-SLW

Query:  FLASSPTNLTPDSPPDPVIEVLGG
        FLASSPTNLTPDSPPDPVI VLGG
Subjt:  FLASSPTNLTPDSPPDPVIEVLGG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G26960.1 unknown protein

8.5e-07

33.62

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Query:  RSGNSQSETFHKYLKPGALAQIRNSRM-IARFN---RVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTN
        RS   +++ FH+Y+KPGALAQIRN+R+  AR N     +L   +   +SSS    +   Q   +D  P    ++YGP  + RKKL  ++      S+   
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRM-IARFN---RVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTN

Query:  LTPDSPPDPVIEVLGG
        L P   P+ ++E + G
Subjt:  LTPDSPPDPVIEVLGG

AT5G54970.1 unknown protein

3.1e-09

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Query:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQI--------YSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSL
        +S   +S+ FH+YLKPGALAQIRNSR+ AR +  +LVS+          S + +S+   +   +   +D  P    ++YGP S QRKKL A++S+
Subjt:  RSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQI--------YSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSL

Sequences

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CDS sequence

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ATGAATCGAAGATCCAGAAGATCGGGGAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGGATGATCGCTCGATT
CAATCGGGTTAATTTGGTATCTCAGATCTACTCCACTACTTCTTCCAGTCTACCGATCGACTCCGGTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTG
GGAGGGTGTATGGCCCTCTCTCTTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTTCTCGCTTCTAGCCCTACCAATCTCACACCTGATTCTCCGCCTGAT
CCGGTTATTGAAGTGTTAGGGGGGTGA

mRNA sequence

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ATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCAATCCTCGTCTTCATCTTCTTCTTCCGTCGCTCGGACATCATGAATCGAAGATCCAGAAGAT
CGGGGAACTCTCAATCCGAGACGTTTCACAAGTATCTAAAGCCTGGTGCGCTAGCACAAATTCGGAATTCTCGGATGATCGCTCGATTCAATCGGGTTAATTTGGTATCT
CAGATCTACTCCACTACTTCTTCCAGTCTACCGATCGACTCCGGTTTACTTCAGGTCAACATTGTTGATGCTTCTCCTTCCTTTGCTGGGAGGGTGTATGGCCCTCTCTC
TTTGCAGAGGAAGAAACTTTTGGCTTCCAAGTCTTTGTGGTTTCTCGCTTCTAGCCCTACCAATCTCACACCTGATTCTCCGCCTGATCCGGTTATTGAAGTGTTAGGGG
GGTGAATTGTATAAGTCTTTTTCTATGGAATACTTTCAACCTGTGAATCGAGTCTTTCTTTGTGAAATTAAATATCAAACTGTAATACATGATACCTTTTGTAGGTAGTG
TTGACGATGGGTTGTGAATTTTATTCTTCTTGATTTTGATCGGATTTAAATAATAAGATCTATCATATGATCGATCTATTGTGTTTACGACACCGAGTCGGTTTTATTGT
TCAGTTTTGTTTATCTACGCCATTCTATTGAACTTATCTAAGCTAGGGCTCATTTTGGACCTTAATGCTTGGGGCTTATGTTGGACTTCTGGTCAACTTTGGTCCTCGAC
TTATAAAGTAAGGGTTCGAAGCATTTGCAAACTTCTTCCAGCAATTTCACCAATAATGCGGGTCAGTTTTCTCTTGTTTACTTGGTTTGTTCATTAACTG

Protein sequence

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MNRRSRRSGNSQSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTTSSSLPIDSGLLQVNIVDASPSFAGRVYGPLSLQRKKLLASKSLWFLASSPTNLTPDSPPD
PVIEVLGG

IVF0016188 (gene) of Melon (IVF77) v1 genome