; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0016205 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016205
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr04:7905329..7907086
RNA-Seq ExpressionIVF0016205
SyntenyIVF0016205
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR005162 - Retrotransposon gag domain
IPR021109 - Aspartic peptidase domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.28e-23569.47Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MP+G+PRKHPDAEASNAA+EAAMGSGESDAESSRP VE NVEEQLLDRLAQRL+ GIR AQSD EKKYG ERLKALGATTF GTTNP D E WLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        F+VTR  EDRKVELAAFLLQN AEDWW MEE+           EFKKAFFDKFYP SF DAKHN                           +VI D+ ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRV+KSLNERKRERE SKN+ TFS SMHRNR GK RSGRFVP VSSRG+FKSQY+GSSFSKSRSGGGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC QL HYRRDCPHLIPG                                G +GRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VT                                          EVDLI LNIQ+FDVILGMDFLSNHYASLNCHQKEIVFKRP KSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDI
        IFRG+RKILPTYVI ALKASKLLRKGCTAYLAHVMDTQISKL LEDI
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDI

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]0.091.43Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEENEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE
        FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE+                        R T GTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEENEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE

Query:  IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS
        IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS
Subjt:  IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS

Query:  STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI
        STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI
Subjt:  STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI

Query:  VTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT
        VT           E   +    GDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT
Subjt:  VTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT

Query:  YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
        YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
Subjt:  YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP

KAA0060484.1 Gag protease polyprotein-like protein [Cucumis melo var. makuwa]3.18e-30081.31Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MP+G+PRKHPDAEASNAA+EAAMGSGE                               S QSDPEKKYG ERLKALGATTFAGTTNP D EAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        FRVTR  EDRKVELAAFLLQN AEDWWRMEE           NEFKKAFFDKFYPRSFRDAK NEF+RLTQG+MT+AEYEKKYTELS YATRVI DE ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLVE ALRVEKSLNERK+ERE SKN+ TFSSSMHRNR GKERSGRFVP VSSRG+FKSQY+GSSFSKS S GGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSS SSH ISSTGGSH+ARS+RVVSES KSSVCYNC Q GHYRRDCPHLIPG NTILKTTSQTV QQ R T TSGEGSSGGKQKG VGRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VTVG+ KELESLTEELLIST +GDSFIVNSVYRKCSILIDGETLEVDL PLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRP  SEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR
        +FRG+RKIL T VISALKASKLLRKGCT YL +V+DTQ+SKL LEDIP  R
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR

KAA0067055.1 reverse transcriptase [Cucumis melo var. makuwa]9.43e-23968.78Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD                                S PEKKYG ERLK LGATTF GT NPTD EAWL L EKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        F+VTRY EDRKVELAAFLL+N AEDWW MEE+           EFK AFFDKFYPRSFRDAKHNEF+RLTQG+MT+AEYEKKYTELSKYAT+VI DE ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CK  EEGL                                                                       G+FKSQYSGSSFSKS  GG A
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSS S+H ISST GSH+ARS+RV+S+SGKSSVCYNC QLGHYRRDCPHLIPG NTILKTTSQTV QQLRTT TSGEGSSG KQ GLVGRSRQEGKV AM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VT+GV KELESLTEELLIST VGDSFIVNSVYRKCSILID ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRPRKSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR
        IF G+RKILPTYVIS LKASKLLRKGCTAYLA+VMDTQISKL LEDIP  R
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]0.094.01Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE+           EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPNIVT           E   +    GDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR
        IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP  R
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein3.2e-18969.47Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MP+G+PRKHPDAEASNAA+EAAMGSGESDAESSRP VE NVEEQLLDRLAQRL+ GIR AQSD EKKYG ERLKALGATTF GTTNP D E WLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        F+VTR  EDRKVELAAFLLQN AEDWW MEE+           EFKKAFFDKFYP SF DAKHN                           +VI D+ ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEEN-----------EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLV  ALRV+KSLNERKRERE SKN+ TFS SMHRNR GK RSGRFVP VSSRG+FKSQY+GSSFSKSRSGGGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QR S SSH ISSTGGSH+ARS+RVV ESGKSSVCYNC QL HYRRDCPHLIPG                                G +GRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VT                                          EVDLI LNIQ+FDVILGMDFLSNHYASLNCHQKEIVFKRP KSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDI
        IFRG+RKILPTYVI ALKASKLLRKGCTAYLAHVMDTQISKL LEDI
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDI

A0A5A7T1M0 Reverse transcriptase5.2e-26491.43Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEENEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE
        FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE+                        R T GTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEENEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREE

Query:  IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS
        IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS
Subjt:  IRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTIS

Query:  STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI
        STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI
Subjt:  STGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNI

Query:  VTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT
        VT           E   +    GDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT
Subjt:  VTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPT

Query:  YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
        YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
Subjt:  YVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP

A0A5A7UZM6 Gag protease polyprotein-like protein1.9e-23781.57Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MP+G+PRKHPDAEASNAA+EAAMGSGE                               S QSDPEKKYG ERLKALGATTFAGTTNP D EAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        FRVTR  EDRKVELAAFLLQN AEDWWRMEE           NEFKKAFFDKFYPRSFRDAK NEF+RLTQG+MT+AEYEKKYTELS YATRVI DE ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLVE ALRVEKSLNERK+ERE SKN+ TFSSSMHRNR GKERSGRFVP VSSRG+FKSQY+GSSFSKS S GGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSS SSH ISSTGGSH+ARS+RVVSES KSSVCYNC Q GHYRRDCPHLIPG NTILKTTSQTV QQ R T TSGEGSSGGKQKG VGRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VTVG+ KELESLTEELLIST +GDSFIVNSVYRKCSILIDGETLEVDL PLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRP  SEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
        +FRG+RKIL T VISALKASKLLRKGCT YL +V+DTQ+SKL LEDIP
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP

A0A5D3BB91 Reverse transcriptase7.2e-28294.01Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE           +EFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPNIVT           E   +    GDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR
        IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP  R
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKR

A0A5D3DS52 Reverse transcriptase4.9e-19068.98Show/hide
Query:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC
        MPRG+PRKHPDA+ASNAA+EAAMGSGESD  S                               PEKKYG ERLK LGATTF GT NPTD EAWL L EKC
Subjt:  MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKC

Query:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER
        F+VTRY EDRKVELAAFLL+N AEDWW MEE           +EFK AFFDKFYPRSFRDAKHNEF+RLTQG+MT+AEYEKKYTELSKYAT+VI DE ER
Subjt:  FRVTRYLEDRKVELAAFLLQNDAEDWWRMEE-----------NEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGER

Query:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA
        CK  EEGL                                                                       G+FKSQYSGSSFSKS  GG A
Subjt:  CKRFEEGLREEIRTPVTACADWNDFSKLVEVALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGA

Query:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM
        QRSS S+H ISST GSH+ARS+RV+S+SGKSSVCYNC QLGHYRRDCPHLIPG NTILKTTSQTV QQLRTT TSGEGSSG KQ GLVGRSRQEGKV AM
Subjt:  QRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLGHYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAM

Query:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI
        TQQEAADAPN+VT+GV KELESLTEELLIST VGDSFIVNSVYRKCSILID ETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCH+KEIVFKRPRKSEI
Subjt:  TQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILIDGETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEI

Query:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP
        IF G+RKILPTYVIS LKASKLLRKGCTAYLA+VMDTQISKL LEDIP
Subjt:  IFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGAGGTAAACCTCGAAAGCACCCTGATGCAGAAGCTAGTAACGCTGCTAAAGAAGCAGCGATGGGAAGTGGGGAGTCTGATGCAGAATCTAGTCGCCCTCGTGT
TGAGGAAAACGTGGAAGAACAATTGCTTGATAGATTGGCTCAAAGATTAGTTTCAGGGATTAGATCGGCACAATCAGACCCTGAAAAGAAGTATGGGTTTGAGCGATTGA
AAGCTTTAGGTGCTACTACTTTTGCGGGGACAACAAATCCCACCGATGTTGAAGCATGGCTTACTTTAATTGAAAAGTGCTTCAGAGTAACAAGATATCTGGAGGATAGG
AAGGTGGAACTTGCTGCCTTTTTACTCCAAAATGACGCTGAAGATTGGTGGCGCATGGAAGAAAACGAGTTTAAAAAGGCATTCTTTGATAAATTTTATCCACGCTCCTT
TCGCGATGCAAAACATAATGAGTTTGTAAGGCTCACTCAAGGGACAATGACTGTTGCGGAATATGAGAAGAAGTATACAGAATTGTCTAAGTATGCCACTAGGGTGATTG
TGGATGAAGGGGAAAGATGTAAGAGATTCGAAGAGGGGTTACGAGAGGAAATTCGTACTCCTGTAACAGCTTGTGCAGACTGGAATGATTTCTCTAAGTTAGTAGAGGTA
GCATTAAGGGTAGAAAAAAGTTTAAATGAAAGGAAGCGAGAAAGAGAGGCTTCCAAGAATTTACGTACATTCAGCTCGTCTATGCATCGAAATCGACCAGGTAAAGAAAG
AAGTGGAAGATTTGTTCCCAGGGTGTCTAGCAGAGGAAGTTTTAAGTCTCAGTACAGTGGTTCTTCTTTCTCTAAATCGAGATCAGGCGGAGGAGCCCAGAGATCAAGTG
ACTCTAGTCATACCATATCTTCTACAGGAGGTTCTCATGTTGCTCGATCAAATAGGGTTGTGTCAGAATCTGGCAAGAGTAGTGTATGTTATAACTGCTGTCAGCTAGGA
CATTATCGTAGAGATTGTCCACATCTGATACCAGGGAGTAATACTATCTTGAAGACCACTTCTCAGACAGTAATCCAGCAGCTAAGAACCACAGGAACTAGTGGTGAAGG
CTCTAGTGGGGGAAAACAGAAAGGACTAGTGGGTCGCTCCCGTCAGGAAGGGAAGGTTTTTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACATTGTGACTGTTG
GGGTTGTTAAAGAGTTAGAAAGTCTAACTGAGGAATTATTGATAAGTACACCTGTAGGAGATAGTTTTATAGTCAATAGTGTGTACCGGAAATGTAGTATTCTTATTGAT
GGTGAAACTTTAGAAGTGGATTTGATTCCGTTAAACATTCAGGAGTTTGATGTTATCTTGGGAATGGATTTTCTATCTAATCACTATGCCTCCCTAAATTGTCATCAGAA
AGAGATTGTTTTTAAACGTCCAAGGAAGAGTGAAATCATTTTCCGCGGTGAAAGAAAGATACTTCCCACCTATGTGATCTCTGCTTTGAAGGCCAGTAAATTGTTAAGGA
AGGGTTGTACGGCTTACCTAGCACATGTGATGGATACACAGATTAGTAAGCTAAACCTTGAAGATATACCAGGTAAGAGAATTCCTAGATGTATTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGAGGTAAACCTCGAAAGCACCCTGATGCAGAAGCTAGTAACGCTGCTAAAGAAGCAGCGATGGGAAGTGGGGAGTCTGATGCAGAATCTAGTCGCCCTCGTGT
TGAGGAAAACGTGGAAGAACAATTGCTTGATAGATTGGCTCAAAGATTAGTTTCAGGGATTAGATCGGCACAATCAGACCCTGAAAAGAAGTATGGGTTTGAGCGATTGA
AAGCTTTAGGTGCTACTACTTTTGCGGGGACAACAAATCCCACCGATGTTGAAGCATGGCTTACTTTAATTGAAAAGTGCTTCAGAGTAACAAGATATCTGGAGGATAGG
AAGGTGGAACTTGCTGCCTTTTTACTCCAAAATGACGCTGAAGATTGGTGGCGCATGGAAGAAAACGAGTTTAAAAAGGCATTCTTTGATAAATTTTATCCACGCTCCTT
TCGCGATGCAAAACATAATGAGTTTGTAAGGCTCACTCAAGGGACAATGACTGTTGCGGAATATGAGAAGAAGTATACAGAATTGTCTAAGTATGCCACTAGGGTGATTG
TGGATGAAGGGGAAAGATGTAAGAGATTCGAAGAGGGGTTACGAGAGGAAATTCGTACTCCTGTAACAGCTTGTGCAGACTGGAATGATTTCTCTAAGTTAGTAGAGGTA
GCATTAAGGGTAGAAAAAAGTTTAAATGAAAGGAAGCGAGAAAGAGAGGCTTCCAAGAATTTACGTACATTCAGCTCGTCTATGCATCGAAATCGACCAGGTAAAGAAAG
AAGTGGAAGATTTGTTCCCAGGGTGTCTAGCAGAGGAAGTTTTAAGTCTCAGTACAGTGGTTCTTCTTTCTCTAAATCGAGATCAGGCGGAGGAGCCCAGAGATCAAGTG
ACTCTAGTCATACCATATCTTCTACAGGAGGTTCTCATGTTGCTCGATCAAATAGGGTTGTGTCAGAATCTGGCAAGAGTAGTGTATGTTATAACTGCTGTCAGCTAGGA
CATTATCGTAGAGATTGTCCACATCTGATACCAGGGAGTAATACTATCTTGAAGACCACTTCTCAGACAGTAATCCAGCAGCTAAGAACCACAGGAACTAGTGGTGAAGG
CTCTAGTGGGGGAAAACAGAAAGGACTAGTGGGTCGCTCCCGTCAGGAAGGGAAGGTTTTTGCAATGACACAACAAGAGGCAGCAGATGCACCAAACATTGTGACTGTTG
GGGTTGTTAAAGAGTTAGAAAGTCTAACTGAGGAATTATTGATAAGTACACCTGTAGGAGATAGTTTTATAGTCAATAGTGTGTACCGGAAATGTAGTATTCTTATTGAT
GGTGAAACTTTAGAAGTGGATTTGATTCCGTTAAACATTCAGGAGTTTGATGTTATCTTGGGAATGGATTTTCTATCTAATCACTATGCCTCCCTAAATTGTCATCAGAA
AGAGATTGTTTTTAAACGTCCAAGGAAGAGTGAAATCATTTTCCGCGGTGAAAGAAAGATACTTCCCACCTATGTGATCTCTGCTTTGAAGGCCAGTAAATTGTTAAGGA
AGGGTTGTACGGCTTACCTAGCACATGTGATGGATACACAGATTAGTAAGCTAAACCTTGAAGATATACCAGGTAAGAGAATTCCTAGATGTATTTCCTGA
Protein sequenceShow/hide protein sequence
MPRGKPRKHPDAEASNAAKEAAMGSGESDAESSRPRVEENVEEQLLDRLAQRLVSGIRSAQSDPEKKYGFERLKALGATTFAGTTNPTDVEAWLTLIEKCFRVTRYLEDR
KVELAAFLLQNDAEDWWRMEENEFKKAFFDKFYPRSFRDAKHNEFVRLTQGTMTVAEYEKKYTELSKYATRVIVDEGERCKRFEEGLREEIRTPVTACADWNDFSKLVEV
ALRVEKSLNERKREREASKNLRTFSSSMHRNRPGKERSGRFVPRVSSRGSFKSQYSGSSFSKSRSGGGAQRSSDSSHTISSTGGSHVARSNRVVSESGKSSVCYNCCQLG
HYRRDCPHLIPGSNTILKTTSQTVIQQLRTTGTSGEGSSGGKQKGLVGRSRQEGKVFAMTQQEAADAPNIVTVGVVKELESLTEELLISTPVGDSFIVNSVYRKCSILID
GETLEVDLIPLNIQEFDVILGMDFLSNHYASLNCHQKEIVFKRPRKSEIIFRGERKILPTYVISALKASKLLRKGCTAYLAHVMDTQISKLNLEDIPGKRIPRCIS