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IVF0016216 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0016216
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionKeratin, type I cytoskeletal 10-like
Genome locationchr05:9452850..9453251
RNA-Seq ExpressionIVF0016216
SyntenyIVF0016216
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039661.1 keratin, type I cytoskeletal 10-like [Cucumis melo var. makuwa]5.10e-94100Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF
        GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF

XP_031741744.1 uncharacterized protein LOC116403940 [Cucumis sativus]1.97e-4865.15Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MK YKE+T RLR  +NNT+ QLLLTH EWKARQK ++GDN S+N G    G+D  RW+G+      GRG E QNS GGT NT  GTRDKSHIKCFTCNKM
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV
        GHY S+C GK  DDEAHLTC VEEE +LMM +
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV

XP_031745069.1 uncharacterized protein LOC116405247 [Cucumis sativus]3.18e-4963.64Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MK Y+E+T RLR  +NNT+GQLLLTH EWKARQK ++GDN S+  G    G+D  RW+G+      GRG E QNS GGT NT  GTRDKSHIKCFTCNKM
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV
        GHY S+C GK  D+EAHLTC  EEE TLMM +
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV

XP_031745073.1 uncharacterized protein LOC116405251 [Cucumis sativus]1.68e-4764.39Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MK Y+E+T RLR  +NNT+GQLLLTH EWKARQK ++GDN S+  G    G+D  RW+G+      GRG E QNS GGT NT  GTRDKSHIKCFTCNKM
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV
        GHY S+C GK  D+EAHLTC VEEE TLMM +
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV

XP_038889342.1 uncharacterized protein LOC120079255 [Benincasa hispida]7.33e-5265.15Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MK Y+E+  RL+G   N++GQLLLTH EWK RQK NN +N+SVN    S GSD ERWQG+ R    GRG E QNS GGT NT  GTRDKSHIKCFTCNK 
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV
        GHY S+C GK  DDEAHLTC V+EE TLMM +
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV

TrEMBL top hitse value%identityAlignment
A0A5A7SIJ0 Keratin, type I cytoskeletal 9-like8.2e-1458.33Show/hide
Query:  SYGSDHERWQGQRRGRSHG--RGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMM
        S   D  RW G   G SHG  RG + QN  GGT NT  GTRDKSHIKCFTCNKM HYT++CH K  DD AHLT   ++E  LM+
Subjt:  SYGSDHERWQGQRRGRSHG--RGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMM

A0A5A7TDE3 Keratin, type I cytoskeletal 10-like2.5e-71100Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
        MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKM

Query:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF
        GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF
Subjt:  GHYTSKCHGKIHDDEAHLTCTVEEERTLMMVVF

A0A5D3B747 Keratin, type I cytoskeletal 9-like3.6e-2569.05Show/hide
Query:  SYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV
        S G+D  +WQG+RRGR HGRG+EHQNS+GG  NT  GTRDKSHIKCFTC+K+GHY  + HGK  DDEAHLTCTV+EE +LMM +
Subjt:  SYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMMVV

A0A5K0VFR7 Uncharacterized protein (Fragment)5.9e-1239.86Show/hide
Query:  MKTYKEQTV-RLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSV--NNGHRSYGSDHERWQGQRRGRSH-GRG----VEHQNSMGGTRNTRKGTRDKSHI
        +KTY+E++  R  G   N + QLLLT  EW+ARQK +  D  S     GHR  G      +G+ RGR   GRG     +  +  GG        RD+SHI
Subjt:  MKTYKEQTV-RLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSV--NNGHRSYGSDHERWQGQRRGRSH-GRG----VEHQNSMGGTRNTRKGTRDKSHI

Query:  KCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMM
        +CF CN++GHY  +C      +EAHLT T + E TL++
Subjt:  KCFTCNKMGHYTSKCHGKIHDDEAHLTCTVEEERTLMM

C6JSM1 CCHC-type domain-containing protein5.3e-1341.04Show/hide
Query:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRK-GTRDKSHIKCFTCNK
        +K Y+E+T R  G+  +  GQ+LLT  EW+ARQ+ + GD    + G RS         G  RGR  GRG   +   GG R+    G RDKSHIKCF C++
Subjt:  MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRK-GTRDKSHIKCFTCNK

Query:  MGHYTSKCHG--KIHDDEAHLTCTVEEERTLMMV
        MGHY ++C G  K  ++EAH       E T+++V
Subjt:  MGHYTSKCHG--KIHDDEAHLTCTVEEERTLMMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACATACAAGGAACAGACAGTGCGGCTCCGAGGAAAGGACAACAACACCAATGGACAACTCCTACTTACTCATGTCGAGTGGAAAGCAAGACAAAAACTGAATAA
TGGTGACAACTTTTCGGTGAACAATGGGCACAGATCCTATGGTAGCGATCACGAAAGATGGCAAGGACAAAGACGAGGTCGTAGTCATGGTCGTGGCGTAGAGCATCAAA
ACAGTATGGGAGGCACTAGAAACACTAGAAAAGGCACTCGTGATAAAAGTCACATAAAGTGCTTCACTTGCAACAAGATGGGACATTACACGTCGAAGTGTCATGGAAAA
ATTCATGACGACGAAGCTCATCTAACTTGCACCGTCGAAGAAGAACGAACTTTGATGATGGTCGTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACATACAAGGAACAGACAGTGCGGCTCCGAGGAAAGGACAACAACACCAATGGACAACTCCTACTTACTCATGTCGAGTGGAAAGCAAGACAAAAACTGAATAA
TGGTGACAACTTTTCGGTGAACAATGGGCACAGATCCTATGGTAGCGATCACGAAAGATGGCAAGGACAAAGACGAGGTCGTAGTCATGGTCGTGGCGTAGAGCATCAAA
ACAGTATGGGAGGCACTAGAAACACTAGAAAAGGCACTCGTGATAAAAGTCACATAAAGTGCTTCACTTGCAACAAGATGGGACATTACACGTCGAAGTGTCATGGAAAA
ATTCATGACGACGAAGCTCATCTAACTTGCACCGTCGAAGAAGAACGAACTTTGATGATGGTCGTCTTCTAG
Protein sequenceShow/hide protein sequence
MKTYKEQTVRLRGKDNNTNGQLLLTHVEWKARQKLNNGDNFSVNNGHRSYGSDHERWQGQRRGRSHGRGVEHQNSMGGTRNTRKGTRDKSHIKCFTCNKMGHYTSKCHGK
IHDDEAHLTCTVEEERTLMMVVF